DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:2017198

Gene

Ppp1cc

Synonyms

PP1
PP1C gamma
PP1C gamma 1
PP1C gamma 2

Description

protein phosphatase 1, catalytic subunit, gamma isoform

Locus

NM_013636 UCSC: chr5:122608288-122625278(+) OLP: chr5:122608288-122625278(+)

DB links

Entrez 19047
MGI 104872
Ensembl ENSMUSG00000004455
Vega OTTMUSG00000016349

Feature

protein-coding

GO_BP

4 Terms

GO_MF

3 Terms

GO_CC

3 Terms

KEGG

6 Terms

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	ESC_FPKM	MEF_FPKM	p1C_FPKM	p4C_FPKM	iPSC_FPKM
2017198 (v2.0)	Ppp1cc	NM_013636	19047	122.267	37.6373	73.6243	446.037	572.516	186.601	140.956	58.8457	444.829	194.527

SPR_Histone_Erkek_5KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2017198 (v2.0)	Ppp1cc	19047	676/459	0.0456	423/459	-0.2335	190/459	2.2985	467/459	1.3514	56/459	-0.9647	500/459	-0.4747

SPR_Histone_Erkek_2KaroundTSS

DBTMEE	Gene	Entrez	H3.3_1_ChIP/Input	H3.3_1(Enrich; log2)	H3.3_2_ChIP/Input	H3.3_2(Enrich; log2)	H3K4me3_1_ChIP/Input	H3K4me3_1(Enrich; log2)	H3K4me3_2_ChIP/Input	H3K4me3_2(Enrich; log2)	H3K27me3_1_ChIP/Input	H3K27me3_1(Enrich; log2)	H3K27me3_2_ChIP/Input	H3K27me3_2(Enrich; log2)
2017198 (v2.0)	Ppp1cc	19047	340/170	0.4848	206/170	0.16	171/170	3.5185	421/170	2.6218	12/170	-1.6861	167/170	-0.6205

SPR_Methy_Kobayashi_5KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2017198 (v2.0)	Ppp1cc	19047	80.5787	155	51.99

SPR_Methy_Kobayashi_2KaroundTSS

DBTMEE	Gene	Entrez	Total_mC_levels	Number_of_mCs	Averaged_Methylation_level
2017198 (v2.0)	Ppp1cc	19047	24.7145	91	27.16

SOLiD_OocyteTo4C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno1C_FPKM_gene_guided

N/A

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

N/A

SOLiD_Partheno4C_FPKM_gene_guided

N/A

Illumina_Oo_2C_FPKM_gene_guided

N/A

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

N/A

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0016708 (v1.0)	10771	H3103D01-3	Mm.7793	Ppp1cc	19047	U006132	NAP031352-1		TC897664,TC897657	P37139	U,F,2	3.6081	3.6296	3.8177	4.3792	3.7545	4.0895	3.9923
0016708 (v1.0)	18553	L0214D08-3	Mm.7793	Ppp1cc	19047							3.314	3.0423	3.3192	3.2272	3.5738	3.3959	3.4251

N/A

N/A

N/A