DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0016708

Gene

Ppp1cc

Synonyms

PP1
PP1C gamma
PP1C gamma 1
PP1C gamma 2

Description

protein phosphatase 1, catalytic subunit, gamma isoform

Locus

NM_013636 UCSC: chr5:122608288-122625278(+) OLP: chr5:122608288-122625278(+)

DB links

Entrez 19047
MGI 104872
Ensembl ENSMUSG00000004455
Vega OTTMUSG00000016349

Feature

protein-coding

GO_BP

7 Terms

GO_MF

6 Terms

GO_CC

12 Terms

KEGG

6 Terms

see DBTMEE:2017198 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0016708 (v1.0)	Ppp1cc	NM_013636	19047	39.1127	50.8549	332.093	397.141	100.332

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0016708 (v1.0)	Ppp1cc	NM_013636	19047	40.8959	44.7141	55.4838

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0016708 (v1.0)	Ppp1cc	NM_013636	19047	39.9184	50.3443	43.5977

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0016708 (v1.0)	Ppp1cc	NM_013636	19047	40.9196	44.1017	47.8165

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0016708 (v1.0)	Ppp1cc	NM_013636	19047	307.467	383.455	307.149

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0016708 (v1.0)	Ppp1cc	NM_013636	19047	12.8024	200.862

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0016708 (v1.0)	Ppp1cc	NM_013636	19047	30.9301	27.2769

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0016708 (v1.0)	10771	H3103D01-3	Mm.7793	Ppp1cc	19047	U006132	NAP031352-1		TC897664,TC897657	P37139	U,F,2	3.6081	3.6296	3.8177	4.3792	3.7545	4.0895	3.9923
0016708 (v1.0)	18553	L0214D08-3	Mm.7793	Ppp1cc	19047							3.314	3.0423	3.3192	3.2272	3.5738	3.3959	3.4251

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0016708 (v1.0)	1450149_a_at	Mm.280784	Ppp1cc	NM_013636.3	19047	1037.18	1294.45	5490.25	5355.55	3688.43
0016708 (v1.0)	1452046_a_at	Mm.280784	Ppp1cc	NM_013636.3	19047	116.025	191.1	597.825	667.65	831.825

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0016708 (v1.0)	A_52_P519508	Ppp1cc	NM_013636	19047	1	1	P	0.723	0.19	P
0016708 (v1.0)	A_52_P540434	Ppp1cc	NM_013636	19047	1	1	P	0.937	0.637	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0016708 (v1.0)	Ppp1cc	19047	7	0	5	8	0	5