DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0012146
GeneMatr3
Synonyms
Desc.matrin 3
LocusNM_010771 chr18:35721812-35751699(+)
DB links


Entrez 17184
MGI 1298379
Ensembl ENSMUSG00000037236
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2012118
(v2.0)
Matr3NM_01077117184
21.609195.875697.971550.19271.479127.38568.419960.607671.6975117.614
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0012146
(v1.0)
Matr317184
Maternal RNA0.94947
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012118
(v2.0)
Matr317184
676/3900.2801537/3900.3445279/3903.0788752/3902.27125/390-3.9799100/390-2.5448
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2012118
(v2.0)
Matr317184
363/1530.7299248/1530.5775273/1534.3316719/1533.54221/153-4.238356/153-2.0203
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012118
(v2.0)
Matr317184
43.473313931.28
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2012118
(v2.0)
Matr317184
11.549610511
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012146
(v1.0)
Matr3NM_01077117184
99.608767.826737.388349.549248.2376
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0012146
(v1.0)
Matr3NM_01077117184
460.245314.038222.194280.576236.934
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0012146
(v1.0)
Matr3NM_01077117184
104.157.9026874.0004
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0012146
(v1.0)
Matr3NM_01077117184
101.66167.145744.8934
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0012146
(v1.0)
Matr3NM_01077117184
607.182443.552
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0012146
(v1.0)
Matr3NM_01077117184
104.2117.7944449.2375
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0012146
(v1.0)
Matr3NM_01077117184
34.615847.841749.453
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0012146
(v1.0)
Matr3NM_01077117184
304.362358.736
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0012146
(v1.0)
Matr3NM_01077117184
41.560213.899
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0012146
(v1.0)
Matr3NM_01077117184
5.3213712.1974
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0012146
(v1.0)
11605H3119E12-3Mm.25575Matr317184
U018562NAP094602-001TC846871Q9R0U5U,F,23.67373.65423.34083.73543.87673.94044.0124
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0012146
(v1.0)
1450874_atMm.215034Matr3NM_010771.617184
361.275346.1377.825321.125341.15
0012146
(v1.0)
1434888_a_atMm.215034Matr3NM_010771.617184
1341.510866331044.55858.125
0012146
(v1.0)
1438368_a_atMm.215034Matr3NM_010771.617184
2442.8252153.5251305.3252049.0751874.525
0012146
(v1.0)
1436796_atMm.215034Matr3NM_010771.617184
000538.5289.325
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0012146
(v1.0)
Matr317184
100100