Statistics of DBTMEE
| Table name | Number of records | Description |
|---|---|---|
| Agilent44K | 15518 | Microarray profile [PMID:21344949] |
| Illumina_Oo_2C_FPKM_gene_guided | 14837 | RNA-seq: Profile in Oocyte and 2-cell stage (RefSeq annotation-guided gene level) [PMID:22722858] |
| MOE430 | 14428 | Microarray profile [PMID:15282163] |
| NIA60mer | 20138 | Microarray profile [PMID:14723852] |
| Proteome | 3251 | Proteome by semiquantitative MS analysis [PMID:20876089] |
| SOLiD_Cluster_gene_guided | 34344 [HTML]
|
Expression patterns in RNA-seq profile |
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided | 18226 | RNA-seq: mRNA profile in Oocyte, Sperm, and 1-cell stage (RefSeq annotation-guided gene level) [PMID:22242016] |
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided | 17169 | RNA-seq: mRNA profile in Oocyte, Sperm, and parthenogenetic 1-cell stage (RefSeq annotation-guided gene level) [PMID:22242016] |
| SOLiD_OocyteTo4C_FPKM_gene_guided | 18232 | RNA-seq: mRNA profile in Oocyte, 1-cell, 2-cell, 4-cell and MEF (RefSeq annotation-guided gene level expression) |
| SOLiD_Partheno1C_FPKM_gene_guided | 17343 | RNA-seq: mRNA profile in Oocyte, 1-cell, parthenogenetic 1-cell stages (RefSeq annotation-guided gene level) |
| SOLiD_Partheno4C_FPKM_gene_guided | 17314 | RNA-seq: mRNA profile in Oocyte, 1-cell, parthenogenetic 1-cell stages (RefSeq annotation-guided gene level) |
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided | 12385 | Single Cell RNA-seq: FPKMs in oocyte replicates (RefSeq annotation-guided gene level) [PMID:19349980] |
| SPR_Histone_Erkek_2KaroundTSS | 18965 | Histone Enrichments +/-2Kbp from TSS in sperm [PMID:23770822] |
| SPR_Histone_Erkek_5KaroundTSS | 18476 | Histone Enrichments +/-5Kbp from TSS in sperm [PMID:23770822] |
| SPR_Methy_Kobayashi_2KaroundTSS | 19449 | Methylation levels +/-2Kbp from TSS in sperm [PMID:22242016] |
| SPR_Methy_Kobayashi_5KaroundTSS | 18726 | Methylation levels +/-5Kbp from TSS in sperm [PMID:22242016] |
| TMEE_GENE | 152433[HTML]
|
Gene information compiled from RefSeq, MGI and NCBI |
| Ver2_FPKM | 20724 | RNA-seq: updated RNA profile (Version 2.0, RefSeq annotation-guided coding and non-coding gene levels). This contains ES-cells and iPS-cells ([PMID:24527385]) |
| Ver2_REPLICA_FPKM | 20471 | RNA-seq: updated FPKMs in replicates (Version 2.0, RefSeq annotation-guided coding and non-coding gene levels) |
| Ver2_REPLICA_MappedRead | 20051 | RNA-seq: updated Mapped reads in replicates (Version 2.0, RefSeq annotation-guided coding and non-coding gene levels) |
