DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017926
GeneRnf19b
SynonymsIbrdc3
Desc.ring finger protein 19B
LocusNM_029219 chr4:128735515-128761770(+)
DB links


Entrez 75234
MGI 1922484
Ensembl ENSMUSG00000028793
Vega OTTMUSG00000009622
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018453
(v2.0)
Rnf19bNM_02921975234
72.574966.496117.929158.332145.11216.084411.218152.699127.38916.2253
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017926
(v1.0)
Rnf19b75234
2-Cell Transient0.95435
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018453
(v2.0)
Rnf19b75234
990/4750.5457651/4750.33791303/4755.02163752/4754.305747/475-1.2616380/475-0.9186
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018453
(v2.0)
Rnf19b75234
520/1741.0623332/1740.81231004/1746.03382454/1745.129116/174-1.3318127/174-1.0448
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018453
(v2.0)
Rnf19b75234
74.077414052.91
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018453
(v2.0)
Rnf19b75234
23.83028627.71
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017926
(v1.0)
Rnf19bNM_02921975234
69.12281.9093117.886100.6397.99487
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017926
(v1.0)
Rnf19bNM_02921975234
85.408291.7413140.939126.90710.5155
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017926
(v1.0)
Rnf19bNM_02921975234
72.273326.541489.3649
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017926
(v1.0)
Rnf19bNM_02921975234
70.545981.0869113.276
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017926
(v1.0)
Rnf19bNM_02921975234
207.814277.545
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017926
(v1.0)
Rnf19bNM_02921975234
72.315326.1779124.238
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017926
(v1.0)
Rnf19bNM_02921975234
109.14497.170788.0973
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017926
(v1.0)
Rnf19bNM_02921975234
125.536110.628
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017926
(v1.0)
Rnf19bNM_02921975234
65.672230.2562
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017926
(v1.0)
Rnf19bNM_02921975234
29.887527.4102
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017926
(v1.0)
1432478_a_atMm.259672Rnf19bNM_029219.175234
0109.175121.6597.87546.8
0017926
(v1.0)
1435226_atMm.259672Rnf19bNM_029219.175234
0267.125315.275296.7250
Agilent44K N/A
Proteome N/A