DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2019849
GeneSlx4
SynonymsBtbd12
D16Bwg1016e
DescriptionSLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)
LocusNM_177472 UCSC: chr16:3979106-4001678(-) OLP: chr16:3979106-4001678(-)
DB links


Entrez 52864
MGI 106299
Ensembl ENSMUSG00000039738
Vega OTTMUSG00000017267
Featureprotein-coding
GO_BP
  •   9 Terms
      double-strand break repair via homologous recombination (GO:0000724)
      DNA catabolic process, endonucleolytic (GO:0000737)
      DNA replication (GO:0006260)
      DNA repair (GO:0006281)
      nucleotide-excision repair (GO:0006289)
      DNA recombination (GO:0006310)
      cellular response to DNA damage stimulus (GO:0006974)
      DNA double-strand break processing involved in repair via single-strand annealing (GO:0010792)
      positive regulation of catalytic activity (GO:0043085)
GO_MF
  •   4 Terms
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019849
(v2.0)		Slx4NM_17747252864
4.4642311.407619.853913.26768.137034.655287.3626321.94157.538114.67733
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019849
(v2.0)		Slx452864
802/4630.2792584/4630.21831008/4634.68762539/4633.779229/463-1.9031191/463-1.8685
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019849
(v2.0)		Slx452864
414/2240.3719304/2240.3231509/2244.7121361/2243.91936/224-2.968866/224-2.336
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019849
(v2.0)		Slx452864
66.866713350.28
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019849
(v2.0)		Slx452864
33.21816650.33
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A