DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2019951
GeneSmurf2
Synonyms
DescriptionSMAD specific E3 ubiquitin protein ligase 2
LocusNM_025481 UCSC: chr11:106681378-106782029(-) OLP: chr11:106681378-106782029(-)
DB links


Entrez 66313
MGI 1913563
Ensembl ENSMUSG00000018363
Vega OTTMUSG00000003584
Featureprotein-coding
GO_BP
  •   5 Terms
      ubiquitin-dependent protein catabolic process (GO:0006511)
      transforming growth factor beta receptor signaling pathway (GO:0007179)
      protein ubiquitination (GO:0016567)
      ubiquitin-dependent SMAD protein catabolic process (GO:0030579)
      protein ubiquitination involved in ubiquitin-dependent protein catabolic process (GO:0042787)
GO_MF
  •   16 Terms
      ubiquitin-protein transferase activity (GO:0004842)
      transforming growth factor beta receptor binding (GO:0005160)
      protein binding (GO:0005515)
      UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity (GO:0008766)
      ligase activity (GO:0016874)
      ribosomal S6-glutamic acid ligase activity (GO:0018169)
      identical protein binding (GO:0042802)
      coenzyme F420-0 gamma-glutamyl ligase activity (GO:0043773)
      coenzyme F420-2 alpha-glutamyl ligase activity (GO:0043774)
      SMAD binding (GO:0046332)
      protein-glycine ligase activity (GO:0070735)
      protein-glycine ligase activity, initiating (GO:0070736)
      protein-glycine ligase activity, elongating (GO:0070737)
      tubulin-glycine ligase activity (GO:0070738)
      protein-glutamic acid ligase activity (GO:0070739)
      tubulin-glutamic acid ligase activity (GO:0070740)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019951
(v2.0)		Smurf2NM_02548166313
5.4260720.44127.679123.779413.51537.237977.9093224.413913.7287.39077
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019951
(v2.0)		Smurf266313
658/3220.5169493/3220.497303/3223.4647732/3222.506873/322-0.0822469/322-0.0566
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2019951
(v2.0)		Smurf266313
370/1650.6491242/1650.4341298/1654.3564701/1653.398510/165-1.8851124/165-1.0027
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019951
(v2.0)		Smurf266313
40.998313131.3
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2019951
(v2.0)		Smurf266313
8.9223979.2
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A