DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2020882
GeneTaf5
Synonyms
DescriptionTAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor
LocusNM_177342 UCSC: chr19:47142238-47157969(+) OLP: chr19:47142238-47157969(+)
DB links


Entrez 226182
MGI 2442144
Ensembl ENSMUSG00000025049
Featureprotein-coding
GO_BP
  •   5 Terms
      transcription, DNA-templated (GO:0006351)
      DNA-templated transcription, initiation (GO:0006352)
      regulation of transcription, DNA-templated (GO:0006355)
      transcription initiation from RNA polymerase II promoter (GO:0006367)
      histone acetylation (GO:0016573)
GO_MF
  •   5 Terms
GO_CC
KEGG
  •   1 Terms
      Basal transcription factors (mmu03022)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2020882
(v2.0)		Taf5NM_177342226182
1.2404435.750467.68536.502214.14127.415023.8609350.099612.88626.68108
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020882
(v2.0)		Taf5226182
714/3810.3924497/3810.2666116/3811.8526324/3811.092449/381-0.8877396/381-0.5419
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2020882
(v2.0)		Taf5226182
369/1360.9222255/1360.7862102/1363.0768303/1362.465310/136-1.613785/136-1.2625
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020882
(v2.0)		Taf5226182
58.424214939.21
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2020882
(v2.0)		Taf5226182
7.1073957.48
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A