DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2021062
GeneTcf3
SynonymsTcf7l1
Descriptiontranscription factor 7 like 1 (T cell specific, HMG box)
LocusNM_001164147 UCSC: chr10:79871910-79896398(-) OLP: chr10:79871910-79896398(-)
NM_001164152 UCSC: chr10:79871910-79896398(-) OLP: chr10:79871910-79896398(-)
NM_001164151 UCSC: chr10:79871910-79896398(-) OLP: chr10:79871910-79896398(-)
NM_011548 UCSC: chr10:79871910-79896398(-) OLP: chr10:79871910-79896398(-)
NM_001164150 UCSC: chr10:79871910-79896398(-) OLP: chr10:79871910-79896398(-)
NM_001164149 UCSC: chr10:79871910-79896398(-) OLP: chr10:79871910-79896398(-)
NM_001164153 UCSC: chr10:79871910-79896398(-) OLP: chr10:79871910-79896398(-)
NM_001164148 UCSC: chr10:79871910-79896398(-) OLP: chr10:79871910-79896398(-)
DB links


Entrez 21423
MGI 98510
Ensembl ENSMUSG00000020167
Vega OTTMUSG00000019126
Featureprotein-coding
GO_BP
  •   26 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      natural killer cell differentiation (GO:0001779)
      B cell lineage commitment (GO:0002326)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      nervous system development (GO:0007399)
      positive regulation of gene expression (GO:0010628)
      lymphocyte differentiation (GO:0030098)
      cell differentiation (GO:0030154)
      positive regulation of B cell proliferation (GO:0030890)
      response to lipopolysaccharide (GO:0032496)
      T cell differentiation in thymus (GO:0033077)
      immunoglobulin V(D)J recombination (GO:0033152)
      response to drug (GO:0042493)
      histone H3 acetylation (GO:0043966)
      histone H4 acetylation (GO:0043967)
      positive regulation of neuron differentiation (GO:0045666)
      positive regulation of cell cycle (GO:0045787)
      positive regulation of transcription, DNA-templated (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      cell development (GO:0048468)
      Peyer's patch development (GO:0048541)
      protein stabilization (GO:0050821)
      positive regulation of sequence-specific DNA binding transcription factor activity (GO:0051091)
      regulation of G1/S transition of mitotic cell cycle (GO:2000045)
GO_MF
  •   19 Terms
      RNA polymerase II core promoter proximal region sequence-specific DNA binding (GO:0000978)
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription (GO:0001078)
      DNA binding (GO:0003677)
      chromatin binding (GO:0003682)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      transcription coactivator activity (GO:0003713)
      protein binding (GO:0005515)
      transcription factor binding (GO:0008134)
      PDZ domain binding (GO:0030165)
      mitogen-activated protein kinase kinase kinase binding (GO:0031435)
      protein homodimerization activity (GO:0042803)
      bHLH transcription factor binding (GO:0043425)
      sequence-specific DNA binding (GO:0043565)
      transcription regulatory region DNA binding (GO:0044212)
      protein heterodimerization activity (GO:0046982)
      protein dimerization activity (GO:0046983)
      repressing transcription factor binding (GO:0070491)
      vitamin D response element binding (GO:0070644)
      E-box binding (GO:0070888)
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021062
(v2.0)		Tcf3NM_001164147,NM_001164148,NM_001164149,NM_001164150,NM_001164151,NM_001164152,NM_001164153,NM_01154821423
12.880417.683921.246610.35298.6617424.965637.34126.40877.4605722.5346
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021062
(v2.0)		Tcf321423
815/5040.1802317/504-0.7831173/5042.0324465/5041.21129/504-2.0245345/504-1.1427
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021062
(v2.0)		Tcf321423
370/2010.3659144/201-0.5937117/2012.7481319/2011.98425/201-3.037982/201-1.8736
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021062
(v2.0)		Tcf321423
72.450217042.62
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021062
(v2.0)		Tcf321423
23.32029923.56
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0020458
(v1.0)		5200AJ223069.1Mm.28396Tcf321415
U027481NAP009197-001Tcf3;TC821298Q9Z1J12.64652.64582.53952.51962.74752.65853.0414
MOE430 N/A
Agilent44K N/A
Proteome N/A