DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2023341
GeneYap1
SynonymsYap
Yki
yorkie
Descriptionyes-associated protein 1
LocusNM_001171147 UCSC: chr9:7932001-8004596(-) OLP: chr9:7932001-8004596(-)
NM_009534 UCSC: chr9:7932001-8004596(-) OLP: chr9:7932001-8004596(-)
DB links


Entrez 22601
MGI 103262
Ensembl ENSMUSG00000053110
Vega OTTMUSG00000038037
Featureprotein-coding
GO_BP
  •   28 Terms
      vasculogenesis (GO:0001570)
      embryonic heart tube morphogenesis (GO:0003143)
      transcription, DNA-templated (GO:0006351)
      regulation of transcription, DNA-templated (GO:0006355)
      regulation of transcription from RNA polymerase II promoter (GO:0006357)
      transcription from RNA polymerase II promoter (GO:0006366)
      cellular response to DNA damage stimulus (GO:0006974)
      cell proliferation (GO:0008283)
      positive regulation of cell proliferation (GO:0008284)
      regulation of keratinocyte proliferation (GO:0010837)
      keratinocyte differentiation (GO:0030216)
      negative regulation of epithelial cell differentiation (GO:0030857)
      notochord development (GO:0030903)
      somatic stem cell maintenance (GO:0035019)
      hippo signaling (GO:0035329)
      regulation of cell proliferation (GO:0042127)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      positive regulation of organ growth (GO:0046622)
      paraxial mesoderm development (GO:0048339)
      lateral mesoderm development (GO:0048368)
      contact inhibition (GO:0060242)
      regulation of canonical Wnt signaling pathway (GO:0060828)
      cellular response to gamma radiation (GO:0071480)
      regulation of stem cell proliferation (GO:0072091)
      regulation of metanephric nephron tubule epithelial cell differentiation (GO:0072307)
      positive regulation of canonical Wnt signaling pathway (GO:0090263)
      regulation of RNA biosynthetic process (GO:2001141)
      negative regulation of extrinsic apoptotic signaling pathway (GO:2001237)
GO_MF
  •   7 Terms
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2023341
(v2.0)		Yap1NM_001171147,NM_00953422601
14.0276147.356290.661151.98159.353827.866712.1149325.74163.848826.7514
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2023341
(v2.0)		Yap122601
794/4170.4154513/4170.1823125/4171.8331411/4171.3052412/4172.02952078/4171.7153
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2023341
(v2.0)		Yap122601
451/1590.9868266/1590.623113/1593.015291/1592.1856170/1592.1255827/1591.7731
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2023341
(v2.0)		Yap122601
41.992419221.87
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2023341
(v2.0)		Yap122601
11.92641587.55
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A