DBTMEE:0003049
| Gene | Atp2a2 |
| Synonyms | D5Wsu150e
sarco/endoplasmic reticulum Ca2+-ATPase 2
SERCA2
SERCA2B |
| Description | ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 |
| Locus | NR_027838 UCSC: chr5:122903522-122952234(-) OLP: chr5:122903522-122952234(-)
NM_009722 UCSC: chr5:122903522-122952234(-) OLP: chr5:122903522-122952234(-)
NM_001110140 UCSC: chr5:122906333-122952234(-) OLP: chr5:122906333-122952234(-)
|
| DB links |
Entrez 11938
MGI 88110
Ensembl ENSMUSG00000029467
|
| Feature | protein-coding |
| GO_BP |
-
 14 Terms
|
| GO_MF |
-
13 Terms
|
| GO_CC |
-
6 Terms
|
| KEGG |
-
7 Terms
Calcium signaling pathway (mmu04020)
Cardiac muscle contraction (mmu04260)
Pancreatic secretion (mmu04972)
Alzheimer's disease (mmu05010)
Hypertrophic cardiomyopathy (HCM) (mmu05410)
Arrhythmogenic right ventricular cardiomyopathy (ARVC) (mmu05412)
Dilated cardiomyopathy (mmu05414)
|
| Ver2_FPKM |
see DBTMEE:2002954 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0003049
(v1.0) | Atp2a2 | NM_001110140,NM_009722 | 11938
| 264.544 | 296.906 | 109.574 | 56.1885 | 21.2709 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0003049
(v1.0) | Atp2a2 | NM_001110140,NM_009722 | 11938
| 276.605 | 27.244 | 323.931 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0003049
(v1.0) | Atp2a2 | NM_001110140,NM_009722 | 11938
| 269.994 | 293.925 | 329.976 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0003049
(v1.0) | Atp2a2 | NM_001110140,NM_009722 | 11938
| 276.766 | 26.8708 | 361.906 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0003049
(v1.0) | Atp2a2 | NM_001110140,NM_009722 | 11938
| 101.449 | 54.2522 | 64.9631 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0003049
(v1.0) | Atp2a2 | NM_001110140,NM_009722 | 11938
| 209.987 | 52.2975 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0003049
(v1.0) | Atp2a2 | NM_001110140,NM_009722 | 11938
| 76.4435 | 89.2281 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0003049
(v1.0) | 464 | C0110C02-3 | Mm.42255 | Atp2a2 | 11938
| | | | | | | 4.3957 | 4.2696 | 3.4726 | 3.717 | 3.4952 | 3.6032 | 3.4722 |
0003049
(v1.0) | 11185 | H3109F07-3 | Mm.42255 | Atp2a2 | 11938
| U026698 | NAP104096-1 | Atp2a2; | TC799450,TC799449,TC799447 | O54994 | U,F,2 | 3.3124 | 3.0301 | 2.6063 | 2.4165 | 3.0733 | 2.9942 | 2.9927 |
0003049
(v1.0) | 16721 | K0446B11-3 | Mm.42255 | Atp2a2 | 11938
| | | Atp2a2 | | | | 2.9895 | 2.949 | 2.8876 | 2.9009 | 2.9048 | 2.9261 | 2.8414 |
0003049
(v1.0) | 18480 | L0209B04-3 | Mm.42255 | Atp2a2 | 11938
| | | Atp2a2 | | | | 3.1125 | 2.8583 | 2.8167 | 2.7298 | 2.271 | 2.5603 | 2.3489 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0003049
(v1.0) | 1416551_at | Mm.227583 | Atp2a2 | NM_001110140.3,NM_009722.3 | 11938
| 250 | 414.65 | 212.225 | 0 | 119.7 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0003049
(v1.0) | A_51_P451075 | Atp2a2 | NM_009722 | 11938
| 1 | 1 | P | 0.356 | 0.0621 | P |
0003049
(v1.0) | A_52_P168097 | Atp2a2 | NM_009722 | 11938
| 1 | 1 | P | 0.854 | 0.436 | P |
0003049
(v1.0) | A_52_P569001 | Atp2a2 | AK220538 | 11938
| 1 | 1 | P | 0.729 | 0.195 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0003049
(v1.0) | Atp2a2 | 11938
| 10 | 16 | 9 | 13 | 27 | 16 |
|
