DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0007958

Gene

Gdf9

Synonyms

Gdf-9

Description

growth differentiation factor 9

Locus

NM_008110 UCSC: chr11:53246788-53251404(+) OLP: chr11:53246788-53251404(+)

DB links

Entrez 14566
MGI 95692
Ensembl ENSMUSG00000018238
Vega OTTMUSG00000000055

Feature

protein-coding

GO_BP

4 Terms

GO_MF

2 Terms

GO_CC

2 Terms

KEGG

see DBTMEE:2007889 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0007958 (v1.0)	Gdf9	NM_008110	14566	2322.69	207.264	59.2947	27.4224	0.241364

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0007958 (v1.0)	Gdf9	NM_008110	14566	2428.59	1.73105	226.129

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0007958 (v1.0)	Gdf9	NM_008110	14566	2370.54	205.183	230.19

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0007958 (v1.0)	Gdf9	NM_008110	14566	2430	1.70734	252.464

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0007958 (v1.0)	Gdf9	NM_008110	14566	54.8977	26.4774	66.7598

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0007958 (v1.0)	Gdf9	NM_008110	14566	1079.85	13.7983

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0007958 (v1.0)	Gdf9	NM_008110	14566	2354.58	3287.73

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0007958 (v1.0)	7931	H3056F01-3	Mm.9714	Gdf9	14566	U012594	NAP012200-001	Gdf9;	TC825185,TC825183	Q07105	U,F,2	4.3603	4.9849	4.1831	3.9768	3.5285	3.3571	3.0456
0007958 (v1.0)	14402	J0460C07-3	Mm.9714	Gdf9	14566	U012594	NAP012200-001	Gdf9;	TC825185,TC825183	Q07105	U,F,2	4.2218	4.8615	4.2405	3.9249	3.4724	3.2618	2.9498

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0007958 (v1.0)	1448120_at	Mm.482654	Gdf9		14566	7590.15	9208.35	1447.55	176.925	67.025

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0007958 (v1.0)	A_51_P220806	Gdf9	NM_008110	14566	1	1	P	0.849	0.347	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0007958 (v1.0)	Gdf9	14566	10	19	11	27	57	15