DBTMEE:0016190
Gene | Phf8 |
Synonyms | |
Description | PHD finger protein 8 |
Locus | NM_177201 UCSC: chrX:147955215-148060376(+) OLP: chrX:147955215-148060376(+) NM_001113354 UCSC: chrX:147955215-148068400(+) OLP: chrX:147955215-148068400(+)
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DB links |
Entrez 320595 MGI 2444341 Ensembl ENSMUSG00000041229 Vega OTTMUSG00000017224
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Feature | protein-coding |
GO_BP |
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9 Terms
G1/S transition of mitotic cell cycle (GO:0000082)
histone H3-K9 demethylation (GO:0033169)
histone H4-K20 demethylation (GO:0035574)
positive regulation of transcription, DNA-dependent (GO:0045893)
positive regulation of transcription from RNA polymerase I promoter (GO:0045943)
oxidation-reduction process (GO:0055114)
negative regulation of chromatin silencing at rDNA (GO:0061188)
histone H3-K36 demethylation (GO:0070544)
histone H3-K27 demethylation (GO:0071557)
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GO_MF |
-
10 Terms
chromatin binding (GO:0003682)
iron ion binding (GO:0005506)
zinc ion binding (GO:0008270)
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706)
histone demethylase activity (GO:0032452)
histone demethylase activity (H3-K9 specific) (GO:0032454)
methylated histone residue binding (GO:0035064)
histone demethylase activity (H4-K20 specific) (GO:0035575)
histone demethylase activity (H3-K36 specific) (GO:0051864)
histone demethylase activity (H3-K27 specific) (GO:0071558)
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GO_CC |
-
2 Terms
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KEGG | |
Ver2_FPKM |
see DBTMEE:2016666 (v2.0)
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SPR_Histone_Erkek_5KaroundTSS |
N/A |
SPR_Histone_Erkek_2KaroundTSS |
N/A |
SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
SOLiD_OocyteTo4C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
0016190 (v1.0) | Phf8 | NM_001113354,NM_177201 | 320595
| 31.7603 | 34.9026 | 17.0822 | 5.41674 | 3.97253 | |
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SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
0016190 (v1.0) | Phf8 | NM_001113354,NM_177201 | 320595
| 33.2083 | 5.31454 | 38.0795 |
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SOLiD_Partheno1C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
0016190 (v1.0) | Phf8 | NM_001113354,NM_177201 | 320595
| 32.4146 | 34.5522 | 38.2606 |
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SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
0016190 (v1.0) | Phf8 | NM_001113354,NM_177201 | 320595
| 33.2276 | 5.24175 | 41.9629 |
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SOLiD_Partheno4C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
0016190 (v1.0) | Phf8 | NM_001113354,NM_177201 | 320595
| 15.8155 | 5.23008 | 6.49677 |
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Illumina_Oo_2C_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
0016190 (v1.0) | Phf8 | NM_001113354,NM_177201 | 320595
| 28.3283 | 9.46506 |
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SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
0016190 (v1.0) | Phf8 | NM_001113354,NM_177201 | 320595
| 1.24146 | 1.26357 |
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NIA60mer |
N/A |
MOE430 |
DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
0016190 (v1.0) | 1460398_at | Mm.17156 | Phf8 | NM_001113354.1,NM_177201.5 | 320595
| 231.025 | 257.175 | 100.925 | 83.075 | 60.425 |
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Agilent44K |
DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
0016190 (v1.0) | A_51_P258698 | Phf8 | AK122447 | 320595
| 1 | 1 | P | 0.554 | 0.113 | P |
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Proteome |
N/A |