DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018190
GeneRtf1
SynonymsGtl7
DescriptionRtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
LocusNM_030112 UCSC: chr2:119500804-119561143(+) OLP: chr2:119500804-119561143(+)
DB links


Entrez 76246
MGI 1309480
Ensembl ENSMUSG00000027304
Vega OTTMUSG00000016508
Featureprotein-coding
GO_BP
  •   12 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      endodermal cell fate commitment (GO:0001711)
      transcription, DNA-dependent (GO:0006351)
      DNA-dependent transcription, initiation (GO:0006352)
      regulation of transcription, DNA-dependent (GO:0006355)
      Wnt receptor signaling pathway (GO:0016055)
      histone modification (GO:0016570)
      stem cell maintenance (GO:0019827)
      positive regulation of transcription elongation from RNA polymerase II promoter (GO:0032968)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      positive regulation of histone H3-K4 methylation (GO:0051571)
      histone H3-K4 trimethylation (GO:0080182)
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2018722 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018190
(v1.0)		Rtf1NM_03011276246
19.164621.569612.550212.83215.75779
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018190
(v1.0)		Rtf1NM_03011276246
20.03843.6463923.5329
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018190
(v1.0)		Rtf1NM_03011276246
19.559421.35324.7912
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018190
(v1.0)		Rtf1NM_03011276246
20.053.5964527.1902
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018190
(v1.0)		Rtf1NM_03011276246
11.619512.38999.74198
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018190
(v1.0)		Rtf1NM_03011276246
27.38597.41405
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018190
(v1.0)		Rtf1NM_03011276246
20.862329.7141
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018190
(v1.0)		13912J0230H11-3Mm.334376530416A09Rik76246
U002321NAP096762-001Gtl7;TC881451Q9CTY6U,F2.5882.65182.71292.62952.33582.4032.3536
0018190
(v1.0)		14857J0900E07-3Mm.334376530416A09Rik76246
2.65192.58972.69442.61753.13982.95723.0749
0018190
(v1.0)		18899L0234D04-3Mm.334376530416A09Rik76246
U002322NAP015091-001TC881451U,F3.44713.32173.24853.42553.70843.57563.6331
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018190
(v1.0)		1429047_atMm.33437Rtf1NM_030112.276246
000853.851026.8
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0018190
(v1.0)		A_51_P164553Gtl7XM_28375776246
11P0.8410.333P
0018190
(v1.0)		A_52_P312826Gtl7XM_28375776246
11P0.760.222P
0018190
(v1.0)		A_52_P312828Gtl7XM_28375776246
11P1.1330.428P
Proteome N/A