DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019336
GeneSmg6
Synonyms
DescriptionSmg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
LocusNM_001002764 UCSC: chr11:74739374-74977950(+) OLP: chr11:74739374-74977950(+)
DB links


Entrez 103677
MGI 2144117
Ensembl ENSMUSG00000038290
Vega OTTMUSG00000006198
Featureprotein-coding
GO_BP
  •   2 Terms
      nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (GO:0000184)
      telomere maintenance (GO:0000723)
GO_MF
GO_CC
KEGG
  •   1 Terms
Ver2_FPKM see DBTMEE:2019898 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019336
(v1.0)		Smg6NM_001002764103677
18.26779.77717.251912.87455.90988
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019336
(v1.0)		Smg6NM_001002764103677
19.10063.1545410.6669
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019336
(v1.0)		Smg6NM_001002764103677
18.64419.6788313.7275
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019336
(v1.0)		Smg6NM_001002764103677
19.11173.1113415.0559
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019336
(v1.0)		Smg6NM_001002764103677
15.972612.430814.275
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019336
(v1.0)		Smg6NM_001002764103677
14.68345.553
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019336
(v1.0)		Smg6NM_001002764103677
2.750083.16612
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019336
(v1.0)		4584C0943A09-3Mm.27034AI317223103677
U033073NAP121602-001U,F3.12993.09913.02923.09513.16993.07493.1093
0019336
(v1.0)		10527H3098F12-3Mm.27034AI317223103677
U043193NAP118824-1TC927180,TC800383,TC800382U,F4.24524.21644.14784.05624.28864.17124.2961
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019336
(v1.0)		1433911_atMm.288460Smg6NM_001002764.1103677
0457.4000
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0019336
(v1.0)		A_51_P320434AI317223NM_001002764103677
11P1.2230.294P
0019336
(v1.0)		A_52_P142883AI317223NM_001002764103677
11P1.1310.435P
0019336
(v1.0)		A_52_P355276AI317223NM_001002764103677
11P0.6480.181P
0019336
(v1.0)		A_52_P628928AI317223NM_001002764103677
11P1.0750.671P
Proteome N/A