DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019374
GeneSmurf1
Synonyms
DescriptionSMAD specific E3 ubiquitin protein ligase 1
LocusNM_029438 UCSC: chr5:145637364-145726699(-) OLP: chr5:145637364-145726699(-)
NM_001038627 UCSC: chr5:145637364-145726699(-) OLP: chr5:145637364-145726699(-)
DB links


Entrez 75788
MGI 1923038
Ensembl ENSMUSG00000038780
Vega OTTMUSG00000021547
Featureprotein-coding
GO_BP
  •   15 Terms
      protein polyubiquitination (GO:0000209)
      cellular protein modification process (GO:0006464)
      protein export from nucleus (GO:0006611)
      transforming growth factor beta receptor signaling pathway (GO:0007179)
      protein ubiquitination (GO:0016567)
      cell differentiation (GO:0030154)
      negative regulation of ossification (GO:0030279)
      BMP signaling pathway (GO:0030509)
      negative regulation of transforming growth factor beta receptor signaling pathway (GO:0030512)
      ubiquitin-dependent SMAD protein catabolic process (GO:0030579)
      positive regulation of protein ubiquitination (GO:0031398)
      receptor catabolic process (GO:0032801)
      protein localization to cell surface (GO:0034394)
      protein ubiquitination involved in ubiquitin-dependent protein catabolic process (GO:0042787)
      proteasomal ubiquitin-dependent protein catabolic process (GO:0043161)
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2019950 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019374
(v1.0)		Smurf1NM_001038627,NM_02943875788
27.284124.48956.939563.672512.5986
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019374
(v1.0)		Smurf1NM_001038627,NM_02943875788
28.52813.6188126.7186
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019374
(v1.0)		Smurf1NM_001038627,NM_02943875788
27.846224.243633.9327
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019374
(v1.0)		Smurf1NM_001038627,NM_02943875788
28.54463.5692537.2163
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019374
(v1.0)		Smurf1NM_001038627,NM_02943875788
6.424963.545955.87706
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019374
(v1.0)		Smurf1NM_001038627,NM_02943875788
14.8321.70308
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019374
(v1.0)		Smurf1NM_001038627,NM_02943875788
16.55969.74022
NIA60mer N/A
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0019374
(v1.0)		A_51_P181227Smurf1NM_02943875788
11P0.9130.57P
0019374
(v1.0)		A_52_P516Smurf1AK12253475788
11P0.5230.0975P
Proteome N/A