DBTMEE:0021764
| Gene | Ubr5 |
| Synonyms | Edd
Edd1 |
| Description | ubiquitin protein ligase E3 component n-recognin 5 |
| Locus | NM_001112721 UCSC: chr15:37897083-38008608(-) OLP: chr15:37897083-38008608(-)
NM_001081359 UCSC: chr15:37897083-38008608(-) OLP: chr15:37897083-38008608(-)
|
| DB links |
Entrez 70790
MGI 1918040
Ensembl ENSMUSG00000037487
|
| Feature | protein-coding |
| GO_BP |
-
 11 Terms
protein polyubiquitination (GO:0000209)
DNA repair (GO:0006281)
cellular protein modification process (GO:0006464)
response to DNA damage stimulus (GO:0006974)
positive regulation of protein import into nucleus, translocation (GO:0033160)
positive regulation of catenin import into nucleus (GO:0035413)
protein ubiquitination involved in ubiquitin-dependent protein catabolic process (GO:0042787)
progesterone receptor signaling pathway (GO:0050847)
positive regulation of canonical Wnt receptor signaling pathway (GO:0090263)
negative regulation of histone H2A K63-linked ubiquitination (GO:1901315)
negative regulation of double-strand break repair (GO:2000780)
|
| GO_MF |
-
7 Terms
|
| GO_CC |
-
3 Terms
|
| KEGG |
-
1 Terms
Ubiquitin mediated proteolysis (mmu04120)
|
| Ver2_FPKM |
see DBTMEE:2022400 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0021764
(v1.0) | Ubr5 | NM_001081359,NM_001112721 | 70790
| 9.03477 | 9.23157 | 48.4641 | 58.962 | 25.5205 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0021764
(v1.0) | Ubr5 | NM_001081359,NM_001112721 | 70790
| 9.44668 | 6.31213 | 10.0718 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0021764
(v1.0) | Ubr5 | NM_001081359,NM_001112721 | 70790
| 9.2209 | 9.13888 | 9.90035 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0021764
(v1.0) | Ubr5 | NM_001081359,NM_001112721 | 70790
| 9.45217 | 6.22568 | 10.8584 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0021764
(v1.0) | Ubr5 | NM_001081359,NM_001112721 | 70790
| 44.8702 | 56.9302 | 49.6223 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0021764
(v1.0) | Ubr5 | NM_001081359,NM_001112721 | 70790
| 10.922 | 47.7883 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0021764
(v1.0) | Ubr5 | NM_001081359,NM_001112721 | 70790
| 1.2801 | 0.954047 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0021764
(v1.0) | 11789 | H3123B06-3 | Mm.7361 | 4432411E13Rik | 70790
| U036111 | NAP095313-001 | 4432411E13Rik; | TC821612,TC799582,TC799581 | Q9CXE9 | U,F,2 | 2.9277 | 3.1197 | 3.1313 | 3.328 | 2.9893 | 2.9882 | 2.9654 |
0021764
(v1.0) | 16748 | K0448E05-3 | Mm.7361 | 4432411E13Rik | 70790
| U036111 | NAP095313-001 | 4432411E13Rik; | TC821612 | Q9CXE9 | U,F,2 | 3.0915 | 3.0054 | 2.795 | 3.0925 | 2.7564 | 2.696 | 2.6444 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0021764
(v1.0) | 1452718_at | Mm.476840 | Ubr5 | NM_001081359.2,NM_001112721.1 | 70790
| 208.275 | 207.725 | 518.15 | 716.775 | 430.125 |
|
| Agilent44K |
N/A |
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0021764
(v1.0) | Ubr5 | 70790
| 0 | 1 | 0 | 0 | 1 | 0 |
|
