DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0022405
GeneVps39
SynonymsmVam6
Vam6
Vam6P
Descriptionvacuolar protein sorting 39 (yeast)
LocusNR_027618 UCSC: chr2:120142197-120178869(-) OLP: chr2:120142197-120178869(-)
NM_178851 UCSC: chr2:120142197-120178869(-) OLP: chr2:120142197-120178869(-)
NM_147153 UCSC: chr2:120142197-120178869(-) OLP: chr2:120142197-120178869(-)
DB links


Entrez 269338
MGI 2443189
Ensembl ENSMUSG00000027291
Vega OTTMUSG00000015284
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2023055 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0022405
(v1.0)		Vps39NM_147153,NM_178851269338
46.489341.06624.335354.541516.60632
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0022405
(v1.0)		Vps39NM_147153,NM_178851269338
48.60883.7196644.8041
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0022405
(v1.0)		Vps39NM_147153,NM_178851269338
47.44740.653947.6321
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0022405
(v1.0)		Vps39NM_147153,NM_178851269338
48.6373.6687152.2413
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0022405
(v1.0)		Vps39NM_147153,NM_178851269338
4.013864.385014.47427
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0022405
(v1.0)		Vps39NM_147153,NM_178851269338
23.53943.99243
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0022405
(v1.0)		Vps39NM_147153,NM_178851269338
4.951368.01623
NIA60mer N/A
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0022405
(v1.0)		A_51_P460828Vps39AK129210269338
11P1.070.622P
Proteome N/A