DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2011630
GeneLmna
SynonymsDhe
lamin A/C
Descriptionlamin A
LocusNM_001002011 UCSC: chr3:88285070-88307274(-) OLP: chr3:88285070-88307274(-)
NM_019390 UCSC: chr3:88287127-88297234(-) OLP: chr3:88287127-88297234(-)
NM_001111102 UCSC: chr3:88287127-88307274(-) OLP: chr3:88287127-88307274(-)
DB links


Entrez 16905
MGI 96794
Ensembl ENSMUSG00000028063
Vega OTTMUSG00000030317
Featureprotein-coding
GO_BP
  •   13 Terms
      nucleus organization (GO:0006997)
      nuclear envelope organization (GO:0006998)
      muscle organ development (GO:0007517)
      establishment of cell polarity (GO:0030010)
      regulation of cell migration (GO:0030334)
      establishment or maintenance of microtubule cytoskeleton polarity (GO:0030951)
      protein localization to nucleus (GO:0034504)
      sterol regulatory element binding protein import into nucleus (GO:0035105)
      ventricular cardiac muscle cell development (GO:0055015)
      negative regulation of release of cytochrome c from mitochondria (GO:0090201)
      positive regulation of cell aging (GO:0090343)
      regulation of protein localization to nucleus (GO:1900180)
      negative regulation of extrinsic apoptotic signaling pathway (GO:2001237)
GO_MF
GO_CC
KEGG
  •   3 Terms
      Hypertrophic cardiomyopathy (HCM) (mmu05410)
      Arrhythmogenic right ventricular cardiomyopathy (ARVC) (mmu05412)
      Dilated cardiomyopathy (mmu05414)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2011630
(v2.0)		LmnaNM_001002011,NM_001111102,NM_01939016905
96.270455.976766.652544.67125.368220.11232.08287.795114.646526.047
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2011630
(v2.0)		Lmna16905
715/517-0.045424/517-0.4014195/5172.1683604/5171.5511194/5170.63951145/5170.5469
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2011630
(v2.0)		Lmna16905
367/2040.3329204/204-0.1156179/2043.3371533/2042.7019139/2041.4855725/2041.226
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2011630
(v2.0)		Lmna16905
95.134612576.11
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2011630
(v2.0)		Lmna16905
26.21435250.41
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0011686
(v1.0)		1095C0177G03-3Mm.3438Lmna16905
U024254NAP001300-001Lmna;TC940143,TC940136,TC940135,TC940132,TC810679P11516U,F,23.21743.27323.62053.99372.9853.28713.4864
0011686
(v1.0)		16224K0344C06-3Mm.3438Lmna16905
U024254NAP001300-001Lmna;TC940132,TC810679P11516U,F,22.82872.89562.68112.76382.56512.73672.8158
MOE430 N/A
Agilent44K N/A
Proteome N/A