DBTMEE:2014866
| Gene | Odf2 |
| Synonyms | cenexin
MMTEST29 |
| Description | outer dense fiber of sperm tails 2 |
| Locus | NM_001113214 UCSC: chr2:29745240-29778058(+) OLP: chr2:29745240-29778058(+)
NM_001177659 UCSC: chr2:29745240-29787266(+) OLP: chr2:29745240-29787266(+)
NM_001113213 UCSC: chr2:29745240-29787266(+) OLP: chr2:29745240-29787266(+)
NM_001177661 UCSC: chr2:29745240-29778058(+) OLP: chr2:29745240-29778058(+)
NM_013615 UCSC: chr2:29745583-29778058(+) OLP: chr2:29745583-29778058(+)
|
| DB links |
Entrez 18286
MGI 1098824
Ensembl ENSMUSG00000026790
Vega OTTMUSG00000019165
|
| Feature | protein-coding |
| GO_BP |
-
 3 Terms
|
| GO_MF |
-
1 Terms
structural constituent of cytoskeleton (GO:0005200)
|
| GO_CC |
-
8 Terms
|
| KEGG | |
| Ver2_FPKM |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | ESC_FPKM | MEF_FPKM | p1C_FPKM | p4C_FPKM | iPSC_FPKM |
|---|
2014866
(v2.0) | Odf2 | NM_001113213,NM_001113214,NM_001177659,NM_001177661,NM_013615 | 18286
| 1598.61 | 35.2442 | 74.5065 | 15.6644 | 13.1106 | 40.2666 | 5.36451 | 70.9022 | 9.71829 | 43.2546 |
|
| SPR_Histone_Erkek_5KaroundTSS |
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2014866
(v2.0) | Odf2 | 18286
| 873/489 | 0.3227 | 494/489 | -0.1013 | 983/489 | 4.5745 | 2662/489 | 3.769 | 92/489 | -0.349 | 558/489 | -0.408 |
|
| SPR_Histone_Erkek_2KaroundTSS |
| DBTMEE | Gene | Entrez | H3.3_1_ChIP/Input | H3.3_1(Enrich; log2) | H3.3_2_ChIP/Input | H3.3_2(Enrich; log2) | H3K4me3_1_ChIP/Input | H3K4me3_1(Enrich; log2) | H3K4me3_2_ChIP/Input | H3K4me3_2(Enrich; log2) | H3K27me3_1_ChIP/Input | H3K27me3_1(Enrich; log2) | H3K27me3_2_ChIP/Input | H3K27me3_2(Enrich; log2) |
|---|
2014866
(v2.0) | Odf2 | 18286
| 452/206 | 0.6184 | 232/206 | 0.055 | 651/206 | 5.1807 | 1432/206 | 4.1121 | 31/206 | -0.6576 | 193/206 | -0.6891 |
|
| SPR_Methy_Kobayashi_5KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2014866
(v2.0) | Odf2 | 18286
| 87.2087 | 191 | 45.66 |
|
| SPR_Methy_Kobayashi_2KaroundTSS |
| DBTMEE | Gene | Entrez | Total_mC_levels | Number_of_mCs | Averaged_Methylation_level |
|---|
2014866
(v2.0) | Odf2 | 18286
| 21.191 | 121 | 17.51 |
|
| SOLiD_OocyteTo4C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno1C_FPKM_gene_guided |
N/A |
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
N/A |
| SOLiD_Partheno4C_FPKM_gene_guided |
N/A |
| Illumina_Oo_2C_FPKM_gene_guided |
N/A |
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
N/A |
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0014402
(v1.0) | 12744 | H3151F04-5 | | Odf2 | 18286
| U042271 | NAP021930-001 | | TC886646,TC886639,TC843900,TC843896,TC843895 | O35135 | U,F,2 | 2.5698 | 2.5846 | 2.512 | 2.4569 | 2.4959 | 2.3816 | 2.5531 |
0014402
(v1.0) | 15381 | K0133C05-3 | Mm.663 | Odf2 | 18286
| U042271 | NAP021930-001 | | TC886640,TC886639,TC843895 | O35135 | U,F,2 | 2.9854 | 3.1259 | 3.0026 | 3.0559 | 2.3536 | 2.664 | 2.7953 |
|
| MOE430 |
N/A |
| Agilent44K |
N/A |
| Proteome |
N/A |
