DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2017162
GenePpfibp1
Synonyms
DescriptionPTPRF interacting protein, binding protein 1 (liprin beta 1)
LocusNM_026221 UCSC: chr6:146837016-146980545(+) OLP: chr6:146837016-146980545(+)
NM_001170433 UCSC: chr6:146837016-146980545(+) OLP: chr6:146837016-146980545(+)
DB links


Entrez 67533
MGI 1914783
Ensembl ENSMUSG00000016487
Vega OTTMUSG00000022991
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017162
(v2.0)		Ppfibp1NM_001170433,NM_02622167533
7.954289.8475521.764221.2929.115719.0385932.96717.633411.27718.97976
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017162
(v2.0)		Ppfibp167533
706/4220.2291466/4220.026890/4221.3469219/4220.38396/422-0.0776612/422-0.0629
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2017162
(v2.0)		Ppfibp167533
354/1700.5427208/1700.173982/1702.4672184/1701.432142/1700.0398221/170-0.2194
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017162
(v2.0)		Ppfibp167533
63.0212749.62
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2017162
(v2.0)		Ppfibp167533
21.06758225.69
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016672
(v1.0)		18349L0202C07-3Mm.103382Ppfibp167533
U007583NAP002097-001Ppfibp1;TC847883,TC847882Q9CUT7U,F3.6953.64893.0493.2082.66242.75143.0945
MOE430 N/A
Agilent44K N/A
Proteome N/A