DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:2021849
GeneTpm3
Synonymsgamma-TM
hTM30nm
hTMnm
skalphaTM.2
Tm5NM
Tpm-5
Tpm5
Trop-5
Descriptiontropomyosin 3, gamma
LocusNM_022314 UCSC: chr3:89876573-89904824(+) OLP: chr3:89876573-89904824(+)
NM_001293748 UCSC: chr3:89876573-89896052(+) OLP: chr3:89876573-89896052(+)
NM_001253738 UCSC: chr3:89883443-89904824(+) OLP: chr3:89883443-89904824(+)
NM_001271764 UCSC: chr3:89883443-89904824(+) OLP: chr3:89883443-89904824(+)
NM_001253740 UCSC: chr3:89883443-89904824(+) OLP: chr3:89883443-89904824(+)
NM_001293749 UCSC: chr3:89883443-89902705(+) OLP: chr3:89883443-89902705(+)
DB links


Entrez 59069
MGI 1890149
Ensembl ENSMUSG00000027940
Vega OTTMUSG00000029647
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2021849
(v2.0)		Tpm3NM_001253738,NM_001253740,NM_001271764,NM_001293748,NM_001293749,NM_02231459069
83.459815.672632.5375135.206157.05799.09796.482531.2112141.25891.3328
SPR_Histone_Erkek_5KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021849
(v2.0)		Tpm359069
663/477-0.0377440/477-0.2322277/4772.7859959/4772.3327131/4770.19181066/4770.5598
SPR_Histone_Erkek_2KaroundTSS
DBTMEEGeneEntrezH3.3_1_ChIP/InputH3.3_1(Enrich; log2)H3.3_2_ChIP/InputH3.3_2(Enrich; log2)H3K4me3_1_ChIP/InputH3K4me3_1(Enrich; log2)H3K4me3_2_ChIP/InputH3K4me3_2(Enrich; log2)H3K27me3_1_ChIP/InputH3K27me3_1(Enrich; log2)H3K27me3_2_ChIP/InputH3K27me3_2(Enrich; log2)
2021849
(v2.0)		Tpm359069
267/212-0.1791157/212-0.546411/212-0.622270/212-0.263968/2120.4103556/2120.7888
SPR_Methy_Kobayashi_5KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021849
(v2.0)		Tpm359069
69.69178186.04
SPR_Methy_Kobayashi_2KaroundTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level
2021849
(v2.0)		Tpm359069
30.11773294.12
SOLiD_OocyteTo4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo_2C_FPKM_gene_guided N/A
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided N/A
NIA60mer
DBTMEEArray_Feature_NumberOligo_Parent_CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0021225
(v1.0)		6298H3022F07-3Tpm359069
2.94442.85593.04863.22673.1163.37953.5204
MOE430 N/A
Agilent44K N/A
Proteome N/A