DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0000025
Gene0610040J01Rik
Synonyms
Desc.RIKEN cDNA 0610040J01 gene
LocusNM_029554 chr5:64203734-64290858(+)
DB links


Entrez 76261
MGI 1923511
Ensembl ENSMUSG00000060512
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2000019
(v2.0)
0610040J01RikNM_02955476261
1.3757814.440832.242411.81076.630091.37923031.87858.511893.04398
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0000025
(v1.0)
0610040J01Rik76261
Minor ZGA0.92986
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2000019
(v2.0)
0610040J01Rik76261
793/4450.3201606/4450.3287399/4453.40841767/4453.3134609/4452.49942747/4452.0242
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2000019
(v2.0)
0610040J01Rik76261
351/1830.4248275/1830.4692153/1833.2595758/1833.3638342/1832.93171452/1832.3824
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2000019
(v2.0)
0610040J01Rik76261
95.579716856.89
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2000019
(v2.0)
0610040J01Rik76261
14.26967219.82
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0000025
(v1.0)
0610040J01RikNM_02955476261
15.012922.39998.789464.605190
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0000025
(v1.0)
0610040J01RikNM_02955476261
18.70625.449310.3295.538540
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0000025
(v1.0)
0610040J01RikNM_02955476261
15.69740.50313524.4387
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0000025
(v1.0)
0610040J01RikNM_02955476261
15.322222.17523.5818
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0000025
(v1.0)
0610040J01RikNM_02955476261
25.839826.8531
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0000025
(v1.0)
0610040J01RikNM_02955476261
15.70650.49624425.8637
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0000025
(v1.0)
0610040J01RikNM_02955476261
8.137674.446495.84649
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0000025
(v1.0)
0610040J01RikNM_02955476261
5.478627.28869
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0000025
(v1.0)
0610040J01RikNM_02955476261
2.139884.80473
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0000025
(v1.0)
0610040J01RikNM_02955476261
2.636970.388744
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0000025
(v1.0)
15535K0202B07-3Mm.381430610040J01Rik76261
U005614NAP096682-0010610040J01Rik;TC936493Q9DCE0U,F,22.9982.80992.96222.93612.83052.76562.7818
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0000025
(v1.0)
1424404_atMm.381430610040J01RikNM_029554.476261
00152.3500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0000025
(v1.0)
A_51_P4836170610040J01RikNM_02955476261
11P0.6180.13P
Proteome N/A