DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0000029
Gene1110001J03Rik
SynonymsFmc1
Desc.RIKEN cDNA 1110001J03 gene
LocusNM_025363 chr6:38484861-38489449(+)
DB links


Entrez 66117
MGI 1913367
Ensembl ENSMUSG00000019689
Vega OTTMUSG00000024224
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2000023
(v2.0)
1110001J03RikNM_02536366117
45.598521.40238.40384.456986.7401853.746939.71644.645810.373859.4206
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0000029
(v1.0)
1110001J03Rik66117
Minor ZGA0.98308
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2000023
(v2.0)
1110001J03Rik66117
613/3920.1319422/392-0.0098719/3924.43421842/3923.555232/392-1.5278202/392-1.5487
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2000023
(v2.0)
1110001J03Rik66117
326/1690.4328237/1690.3697682/1695.51591702/1694.64294/169-3.056348/169-2.3789
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2000023
(v2.0)
1110001J03Rik66117
34.616914923.23
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2000023
(v2.0)
1110001J03Rik66117
5.50751114.96
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0000029
(v1.0)
1110001J03RikNM_02536366117
22.232626.56663.313294.697728.1109
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0000029
(v1.0)
1110001J03RikNM_02536366117
26.651428.66913.701495.4918132.7603
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0000029
(v1.0)
1110001J03RikNM_02536366117
23.246216.675928.9848
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0000029
(v1.0)
1110001J03RikNM_02536366117
22.690626.299933.2394
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0000029
(v1.0)
1110001J03RikNM_02536366117
29.113338.7409
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0000029
(v1.0)
1110001J03RikNM_02536366117
23.259716.447536.4558
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0000029
(v1.0)
1110001J03RikNM_02536366117
3.067594.535817.15683
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0000029
(v1.0)
1110001J03RikNM_02536366117
5.432218.37589
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0000029
(v1.0)
1110001J03RikNM_02536366117
59.12511.2581
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0000029
(v1.0)
1110001J03RikNM_02536366117
138.21586.9366
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0000029
(v1.0)
1416367_atMm.1589711110001J03RikNM_025363.366117
103.100072.675
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0000029
(v1.0)
A_51_P4060771110001J03RikNM_02536366117
11P0.8880.445P
Proteome N/A