DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0000033
Gene1110004F10Rik
Synonymssid2057
Desc.RIKEN cDNA 1110004F10 gene
LocusNM_019772 chr7:123236894-123248724(+)
DB links


Entrez 56372
MGI 1929274
Ensembl ENSMUSG00000030663
Vega OTTMUSG00000023018
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2000026
(v2.0)
1110004F10RikNM_01977256372
54.64144.402925.3432515.591532.807674.406162.85885.7678429.138576.8808
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0000033
(v1.0)
1110004F10Rik56372
MGA0.9884
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2000026
(v2.0)
1110004F10Rik56372
544/3570.0946478/3570.3041150/3572.3115450/3571.6584122/3570.5038559/3570.0474
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2000026
(v2.0)
1110004F10Rik56372
248/1420.2898218/1420.4993143/1423.5029407/1422.828622/142-0.610186/142-1.3078
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2000026
(v2.0)
1110004F10Rik56372
44.459310641.94
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2000026
(v2.0)
1110004F10Rik56372
8.84336813
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0000033
(v1.0)
1110004F10RikNM_01977256372
4.574783.7071311.602222.797844.6077
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0000033
(v1.0)
1110004F10RikNM_01977256372
1.686921.561574.576288.5044115.4915
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0000033
(v1.0)
1110004F10RikNM_01977256372
4.7833519.98294.04455
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0000033
(v1.0)
1110004F10RikNM_01977256372
4.669023.66994.28075
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0000033
(v1.0)
1110004F10RikNM_01977256372
1.585630.878535
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0000033
(v1.0)
1110004F10RikNM_01977256372
4.7861319.70924.69498
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0000033
(v1.0)
1110004F10RikNM_01977256372
10.741922.012220.0778
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0000033
(v1.0)
1110004F10RikNM_01977256372
8.41259.4678
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0000033
(v1.0)
1110004F10RikNM_01977256372
5.073067.02118
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0000033
(v1.0)
1110004F10RikNM_01977256372
4.895784.55598
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0000033
(v1.0)
1284C0192F08-3Mm.24231Smap-pending56372
U008666NAP098775-001Smap;TC793478,TC793475Q9R0P4U,F,22.75732.95073.19293.24283.23543.37883.465
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0000033
(v1.0)
1423335_atMm.242311110004F10RikNM_019772.256372
134.3569.725203.525323.35614.875
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0000033
(v1.0)
A_51_P2870301110004F10RikNM_01977256372
11P0.0130.0157P
Proteome N/A