DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0000658
Gene2410089E03Rik
Synonyms
Desc.RIKEN cDNA 2410089E03 gene
LocusNM_001162906 chr15:8119106-8221158(+)
DB links


Entrez 73692
MGI 1920942
Ensembl ENSMUSG00000039801
Vega OTTMUSG00000022443
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2000591
(v2.0)
2410089E03RikNM_00116290673692
1.845866.025949.0344512.242210.39681.7432320.18427.441499.610671.33732
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0000658
(v1.0)
2410089E03Rik73692
Major ZGA0.87436
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2000591
(v2.0)
2410089E03Rik73692
606/3240.3895432/3240.298164/3242.5745379/3241.550157/324-0.4425366/324-0.422
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2000591
(v2.0)
2410089E03Rik73692
320/1490.5867189/1490.2255157/1493.5727358/1492.575834/149-0.0719156/149-0.5288
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2000591
(v2.0)
2410089E03Rik73692
56.488112246.3
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2000591
(v2.0)
2410089E03Rik73692
26.0518929.27
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0000658
(v1.0)
2410089E03RikNM_00116290673692
6.263396.242659.100117.2215314.0671
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0000658
(v1.0)
2410089E03RikFR267691,FR307536,NM_00116290673692
115.388118.246122.859129.708345.22
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0000658
(v1.0)
2410089E03RikNM_00116290673692
6.548950.675056.81087
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0000658
(v1.0)
2410089E03RikNM_00116290673692
6.392426.179975.50534
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0000658
(v1.0)
2410089E03RikFR267691,FR307536,NM_00116290673692
195.794144.556
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0000658
(v1.0)
2410089E03RikNM_00116290673692
6.552760.6658046.03807
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0000658
(v1.0)
2410089E03RikNM_00116290673692
8.425286.972686.6637
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0000658
(v1.0)
2410089E03RikFR267691,FR307536,NM_00116290673692
207.767153.534
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0000658
(v1.0)
2410089E03RikNM_00116290673692
3.605777.05689
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0000658
(v1.0)
2410089E03RikNM_00116290673692
1.356371.95221
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0000658
(v1.0)
1437439_atMm.1644362410089E03RikNM_001162906.173692
273.625360.75484.025280.225466.275
0000658
(v1.0)
1441571_atMm.1644362410089E03RikNM_001162906.173692
154.55195.5261.575219.725199.1
0000658
(v1.0)
1452951_atMm.1644362410089E03RikNM_001162906.173692
0299.225526.45682.10
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0000658
(v1.0)
A_52_P2362072410089E03RikBC05810773692
11P0.7110.181P
Proteome N/A