DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0000713
Gene2700029M09Rik
Synonyms
Desc.RIKEN cDNA 2700029M09 gene
LocusNM_028299 chr8:63369248-63386369(+)
DB links


Entrez 72612
MGI 1919862
Ensembl ENSMUSG00000038005
Vega OTTMUSG00000031399
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2000637
(v2.0)
2700029M09RikNM_02829972612
15.4631219.319454.178110.13948.356825.056616.603281.55457.992528.126
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0000713
(v1.0)
2700029M09Rik72612
Minor ZGA0.99526
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2000637
(v2.0)
2700029M09Rik72612
610/458-0.0991454/458-0.128674/4580.953261/4580.517658/458-0.9118299/458-1.2104
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2000637
(v2.0)
2700029M09Rik72612
253/179-0.0136182/179-0.091754/1791.804174/1791.278523/179-0.8742102/179-1.3975
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2000637
(v2.0)
2700029M09Rik72612
73.510314052.51
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2000637
(v2.0)
2700029M09Rik72612
25.96839028.85
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0000713
(v1.0)
2700029M09RikNM_02829972612
227.888315.09882.018833.587111.8904
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0000713
(v1.0)
2700029M09RikNM_02829972612
311.833371.94118.11552.3722.8611
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0000713
(v1.0)
2700029M09RikNM_02829972612
238.2775.65501343.778
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0000713
(v1.0)
2700029M09RikNM_02829972612
232.582311.934208.977
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0000713
(v1.0)
2700029M09RikNM_02829972612
1427.71200.75
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0000713
(v1.0)
2700029M09RikNM_02829972612
238.4165.57756229.199
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0000713
(v1.0)
2700029M09RikNM_02829972612
75.936632.429740.1431
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0000713
(v1.0)
2700029M09RikNM_02829972612
90.1049103.735
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0000713
(v1.0)
2700029M09RikNM_02829972612
261.36190.3152
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0000713
(v1.0)
2700029M09RikNM_02829972612
616.921734.58
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0000713
(v1.0)
2908C0453A05-3Mm.252632700029M09Rik72612
U009363NAP019243-0012700029M09Rik;TC848271,TC848270,TC848269Q9CZQ2U,F,24.80985.08874.32833.93063.87953.94453.9304
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0000713
(v1.0)
1452877_atMm.252632700029M09RikNM_028299.172612
4220.358353.553787.975666.6251117.825
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0000713
(v1.0)
A_51_P4505182700029M09RikBC04274072612
11P0.8340.32P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0000713
(v1.0)
2700029M09Rik72612
010010