DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0000849
Gene4833420G17Rik
Synonyms
Desc.RIKEN cDNA 4833420G17 gene
LocusNM_026127 chr13:120251566-120274924(+)
NM_001113550 chr13:120251566-120274924(+)
DB links


Entrez 67392
MGI 1914642
Ensembl ENSMUSG00000062822
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2000758
(v2.0)
4833420G17RikNM_001113550,NM_02612767392
3.869426.790257.487120.647723.19919.4527116.221840.052121.110.1277
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0000849
(v1.0)
4833420G17Rik67392
1-Cell Transient0.9967
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2000758
(v2.0)
4833420G17Rik67392
612/4110.0614400/411-0.154976/4111.1429240/4110.552412/411-2.939388/411-2.8018
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2000758
(v2.0)
4833420G17Rik67392
256/1640.1289183/1640.041773/1642.35233/1641.82215/164-2.75137/164-2.6983
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2000758
(v2.0)
4833420G17Rik67392
79.636915053.09
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2000758
(v2.0)
4833420G17Rik67392
15.33318218.7
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0000849
(v1.0)
4833420G17RikNM_001113550,NM_02612767392
27.844439.781315.374616.077611.362
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0000849
(v1.0)
4833420G17RikFR118665,FR381916,NM_001113550,NM_02612767392
37.838246.990319.879928.358819.9195
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0000849
(v1.0)
4833420G17RikNM_001113550,NM_02612767392
29.11391.4150843.4023
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0000849
(v1.0)
4833420G17RikNM_001113550,NM_02612767392
28.41839.381929.6197
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0000849
(v1.0)
4833420G17RikFR118665,FR381916,NM_001113550,NM_02612767392
50.871342.4212
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0000849
(v1.0)
4833420G17RikNM_001113550,NM_02612767392
29.13081.395732.4859
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0000849
(v1.0)
4833420G17RikNM_001113550,NM_02612767392
14.234515.523614.5734
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0000849
(v1.0)
4833420G17RikFR118665,FR381916,NM_001113550,NM_02612767392
28.052724.6499
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0000849
(v1.0)
4833420G17RikNM_001113550,NM_02612767392
34.866926.2799
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0000849
(v1.0)
4833420G17RikNM_001113550,NM_02612767392
19.20423.48519
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0000849
(v1.0)
7619H3050G10-3Mm.98604833420G17Rik67392
4833420G17RikTC853567,TC8535663.71833.72983.19623.25183.46143.22123.3846
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0000849
(v1.0)
1419635_atMm.3906414833420G17RikNM_026127.4,NM_001113550.167392
65.57565.4553.4538.57533.725
0000849
(v1.0)
1430220_atMm.3906414833420G17RikNM_026127.4,NM_001113550.167392
96.189.75148.8163.85156.225
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0000849
(v1.0)
A_51_P4295724833420G17RikNM_02612767392
11P2.3650.0891P
0000849
(v1.0)
A_52_P6134984833420G17RikNM_02612767392
11P1.1760.351P
Proteome N/A