DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0000856
Gene4833439L19Rik
Synonyms
Desc.RIKEN cDNA 4833439L19 gene
LocusNM_001252648 chr13:54652579-54666743(-)
NM_001252645 chr13:54652579-54666743(-)
NM_001252647 chr13:54652579-54666743(-)
NM_001252646 chr13:54652579-54666743(-)
NM_133797 chr13:54652579-54666743(-)
DB links


Entrez 97820
MGI 1921162
Ensembl ENSMUSG00000025871
Vega OTTMUSG00000032658
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
  •   1 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2000765
(v2.0)
4833439L19RikNM_001252645,NM_001252646,NM_001252647,NM_001252648,NM_13379797820
29.76754.5558411.09814.910322.39219.08223.380312.512920.848621.2165
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0000856
(v1.0)
4833439L19Rik97820
MGA0.92067
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2000765
(v2.0)
4833439L19Rik97820
649/476-0.0654436/476-0.2423109/4761.4513298/4760.652933/476-1.7621311/476-1.2094
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2000765
(v2.0)
4833439L19Rik97820
303/1740.2859186/174-0.0199100/1742.7191266/1741.92836/174-2.6119125/174-1.0674
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2000765
(v2.0)
4833439L19Rik97820
75.428913356.71
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2000765
(v2.0)
4833439L19Rik97820
24.33287532.44
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0000856
(v1.0)
4833439L19RikNM_13379797820
4.320917.3205910.66114.443515.2674
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0000856
(v1.0)
4833439L19RikNM_13379797820
19.771559.715582.132563.113234.5956
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0000856
(v1.0)
4833439L19RikNM_13379797820
4.5179110.32077.98693
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0000856
(v1.0)
4833439L19RikNM_13379797820
4.409927.247098.85324
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0000856
(v1.0)
4833439L19RikNM_13379797820
42.755516.5299
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0000856
(v1.0)
4833439L19RikNM_13379797820
4.5205310.17939.70993
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0000856
(v1.0)
4833439L19RikNM_13379797820
9.8704213.945713.0045
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0000856
(v1.0)
4833439L19RikNM_13379797820
113.39292.3746
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0000856
(v1.0)
4833439L19RikNM_13379797820
4.3206319.5354
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0000856
(v1.0)
4833439L19RikNM_13379797820
4.788793.73912
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0000856
(v1.0)
6443H3025C03-3Mm.245934833439L19Rik97820
U034796NAP120869-0014833439L19Rik;4930558H15Rik;C81457;TC903177,TC903168Q9D4T9U,F,23.40633.30693.64253.47193.80963.66493.7636
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0000856
(v1.0)
1448100_atMm.245934833439L19RikNM_133797.397820
85.1122.875186.475237.7455.475
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0000856
(v1.0)
A_51_P1580074833439L19RikNM_13379797820
11P1.6780.121P
Proteome N/A