DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0001229
Gene4931406C07Rik
Synonyms
Desc.RIKEN cDNA 4931406C07 gene
LocusNM_001199485 chr9:15087781-15110611(-)
NM_001199484 chr9:15087781-15110892(-)
NM_133732 chr9:15087781-15106051(-)
DB links


Entrez 70984
MGI 1918234
Ensembl ENSMUSG00000031938
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001119
(v2.0)
4931406C07RikNM_001199484,NM_001199485,NM_13373270984
12.300514.372232.651816.7949.854527.740678.9798827.67395.656567.21283
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0001229
(v1.0)
4931406C07Rik70984
Minor ZGA0.98886
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001119
(v2.0)
4931406C07Rik70984
584/3850.0881411/385-0.0219186/3852.5145534/3851.796622/385-2.0229108/385-2.4168
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001119
(v2.0)
4931406C07Rik70984
285/1970.0198182/197-0.2292177/1973.3685496/1972.6489/197-2.272536/197-2.9993
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001119
(v2.0)
4931406C07Rik70984
70.174812158
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001119
(v2.0)
4931406C07Rik70984
30.23473197.53
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001229
(v1.0)
4931406C07RikNM_001199484,NM_001199485,NM_13373270984
14.934822.431712.50086.803036.25523
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001229
(v1.0)
4931406C07RikFR157888,FR335476,NM_001199484,NM_001199485,NM_13373270984
18.325325.183415.91568.885467.7427
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0001229
(v1.0)
4931406C07RikNM_001199484,NM_001199485,NM_13373270984
15.61574.4984424.4735
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0001229
(v1.0)
4931406C07RikNM_001199484,NM_001199485,NM_13373270984
15.242422.206520.5045
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0001229
(v1.0)
4931406C07RikFR157888,FR335476,NM_001199484,NM_001199485,NM_13373270984
125.6842.7915
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0001229
(v1.0)
4931406C07RikNM_001199484,NM_001199485,NM_13373270984
15.62474.4368322.4886
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0001229
(v1.0)
4931406C07RikNM_001199484,NM_001199485,NM_13373270984
11.57386.56863.90691
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0001229
(v1.0)
4931406C07RikFR157888,FR335476,NM_001199484,NM_001199485,NM_13373270984
32.277913.0047
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0001229
(v1.0)
4931406C07RikNM_001199484,NM_001199485,NM_13373270984
14.16467.53245
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0001229
(v1.0)
4931406C07RikNM_001199484,NM_001199485,NM_13373270984
7.4639813.5917
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0001229
(v1.0)
22011L0933C12-3Mm.1822274931406C07Rik70984
U030497NAP099064-0014931406C07Rik;TC941178,TC941174,TC941173Q91V76U,F,24.04314.093.76093.513.4463.41243.4042
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0001229
(v1.0)
1416607_atMm.2618424931406C07RikNM_001199484.1,NM_001199485.1,NM_133732.370984
226.7545.2272.3500
0001229
(v1.0)
1454067_a_atMm.2618424931406C07RikNM_001199484.1,NM_001199485.1,NM_133732.370984
53.125130.361.8500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0001229
(v1.0)
A_51_P4456834931406C07RikNM_13373270984
11P0.9750.845P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0001229
(v1.0)
4931406C07Rik70984
461883