DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0001326
Gene4933413G19Rik
Synonyms
Desc.RIKEN cDNA 4933413G19 gene
LocusNM_027697 chr6:128325528-128335162(+)
DB links


Entrez 71149
MGI 1918399
Ensembl ENSMUSG00000079304
Vega OTTMUSG00000023765
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001213
(v2.0)
4933413G19RikNM_008021,NM_02769771149
13.627372.953277.826138.838414.516412.031718.524893.077816.409712.0546
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0001326
(v1.0)
4933413G19RikMaternal RNA0.91494
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001213
(v2.0)
4933413G19Rik71149
812/4490.3413390/449-0.3186124/4491.7178242/4490.437536/449-1.5566306/449-1.1486
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001213
(v2.0)
4933413G19Rik71149
353/1860.4096190/186-0.085116/1862.8411220/1861.560621/186-1.0539142/186-0.9812
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001213
(v2.0)
4933413G19Rik71149
123.766914983.07
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001213
(v2.0)
4933413G19Rik71149
45.93854993.75
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001326
(v1.0)
4933413G19RikNM_008021,NM_02769771149
75.865853.682128.897910.051213.0407
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001326
(v1.0)
4933413G19RikFR251826,NM_008021,NM_02769771149
1691.95714.522572.779202.40980.0546
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0001326
(v1.0)
4933413G19RikNM_008021,NM_02769771149
79.32474.9835958.5684
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0001326
(v1.0)
4933413G19RikNM_008021,NM_02769771149
77.428753.143168.8685
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0001326
(v1.0)
4933413G19RikFR251826,NM_008021,NM_02769771149
71.963592.7878
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0001326
(v1.0)
4933413G19RikNM_008021,NM_02769771149
79.37084.9153375.5327
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0001326
(v1.0)
4933413G19RikNM_008021,NM_02769771149
26.75499.7048411.4308
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0001326
(v1.0)
4933413G19RikFR251826,NM_008021,NM_02769771149
212.54742.2473
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0001326
(v1.0)
4933413G19RikNM_008021,NM_02769771149
24.696836.8631
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0001326
(v1.0)
4933413G19RikNM_008021,NM_02769771149
9.608372.2582
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0001326
(v1.0)
1453107_s_atMm.42148~Mm.338476~Mm.483176Foxm1~Pebp1~4933413G19RikNM_008021.4~~NM_027697.114235
23980
71149
172.225129.2151.82500
Agilent44K N/A
Proteome N/A