DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0001454
Gene5830418K08Rik
SynonymsLOC382128
Desc.RIKEN cDNA 5830418K08 gene
LocusNM_176976 chr9:15121358-15162232(-)
DB links


Entrez 319675
MGI 2442521
Ensembl ENSMUSG00000046111
Vega OTTMUSG00000034159
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001337
(v2.0)
5830418K08RikNM_176976319675
2.9914414.154921.903411.011910.77968.882228.5636717.517911.75516.98707
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0001454
(v1.0)
5830418K08Rik319675
Minor ZGA0.93478
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001337
(v2.0)
5830418K08Rik319675
762/4320.3053593/4320.3401730/4324.31992455/4323.8301149/4320.5179847/4320.3712
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001337
(v2.0)
5830418K08Rik319675
390/2260.2732284/2260.2125626/2264.99781820/2264.325640/226-0.4312237/226-0.528
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001337
(v2.0)
5830418K08Rik319675
48.60479650.63
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001337
(v2.0)
5830418K08Rik319675
21.82516832.1
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001454
(v1.0)
5830418K08RikNM_176976319675
14.709415.10598.190977.46776.02604
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001454
(v1.0)
5830418K08RikFR088438,FR164478,FR177565,FR269815,FR341120,NM_176976319675
4887.0525964.542353.540999.15558.99
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0001454
(v1.0)
5830418K08RikNM_176976319675
15.381.09416.4808
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0001454
(v1.0)
5830418K08RikNM_176976319675
15.012414.954212.973
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0001454
(v1.0)
5830418K08RikFR088438,FR177565,FR269815,NM_176976319675
142.895133.318
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0001454
(v1.0)
5830418K08RikNM_176976319675
15.3891.0790114.2284
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0001454
(v1.0)
5830418K08RikNM_176976319675
7.583567.210368.11726
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0001454
(v1.0)
5830418K08RikFR088438,FR177565,FR269815,NM_176976319675
62.873285.8273
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0001454
(v1.0)
5830418K08RikNM_176976319675
8.1100915.9136
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0001454
(v1.0)
5830418K08RikNM_176976319675
0.949363.6776
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0001454
(v1.0)
10838H3104C09-3Mm.17870U030498NAP122974-15830418K08Rik;TC843480,TC843479,TC8434753.75423.8994.17743.90363.55183.78443.5553
MOE430 N/A
Agilent44K N/A
Proteome N/A