DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0001485
Gene6430548M08Rik
Synonyms
Desc.RIKEN cDNA 6430548M08 gene
LocusNM_001163762 chr8:122638052-122678474(+)
NM_172286 chr8:122638052-122689207(+)
NM_001163761 chr8:122638052-122689207(+)
NM_001163760 chr8:122668829-122689207(+)
DB links


Entrez 234797
MGI 2443793
Ensembl ENSMUSG00000031824
Vega OTTMUSG00000023422
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001373
(v2.0)
6430548M08RikNM_001163760,NM_001163761,NM_001163762,NM_172286234797
11.695826.051225.703711.28774.80390.242761.7341624.54467.19620.269202
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0001485
(v1.0)
6430548M08Rik234797
Maternal RNA0.94541
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001373
(v2.0)
6430548M08Rik234797
617/504-0.2205383/504-0.511137/504-0.1626114/504-0.8077105/504-0.2034913/5040.2574
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001373
(v2.0)
6430548M08Rik234797
267/218-0.2192144/218-0.710223/2180.339787/2180.00648/218-0.123408/2180.3036
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001373
(v2.0)
6430548M08Rik234797
77.037614852.05
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001373
(v2.0)
6430548M08Rik234797
25.72129427.36
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001485
(v1.0)
6430548M08RikNM_001163760,NM_001163761,NM_001163762,NM_172286234797
27.094617.90078.301313.342471.23734
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001485
(v1.0)
6430548M08RikNM_001163760,NM_001163761,NM_001163762,NM_172286234797
133.17864.234937.272415.8043.77948
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0001485
(v1.0)
6430548M08RikNM_001163760,NM_001163761,NM_001163762,NM_172286234797
28.32984.2777819.5301
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0001485
(v1.0)
6430548M08RikNM_001163760,NM_001163761,NM_001163762,NM_172286234797
27.652717.72118.182
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0001485
(v1.0)
6430548M08RikNM_001163760,NM_001163761,NM_001163762,NM_172286234797
35.649345.937
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0001485
(v1.0)
6430548M08RikNM_001163760,NM_001163761,NM_001163762,NM_172286234797
28.34634.2191919.9414
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0001485
(v1.0)
6430548M08RikNM_001163760,NM_001163761,NM_001163762,NM_172286234797
7.685723.227284.96905
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0001485
(v1.0)
6430548M08RikNM_001163760,NM_001163761,NM_001163762,NM_172286234797
12.338726.8843
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0001485
(v1.0)
6430548M08RikNM_001163760,NM_001163761,NM_001163762,NM_172286234797
1.286512.59588
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0001485
(v1.0)
6430548M08RikNM_001163760,NM_001163761,NM_001163762,NM_172286234797
0.1766990.276999
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0001485
(v1.0)
10572H3100A04-3Mm.101958LOC234797234797
U009885NAP038003-16430548M08Rik;TC837697,TC837696Q91W95U,F,22.58382.5832.64642.65392.44362.25982.3195
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0001485
(v1.0)
A_52_P4547656430548M08RikNM_172286234797
11P0.760.418P
Proteome N/A