DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0001499
Gene6820408C15Rik
Synonyms
Desc.RIKEN cDNA 6820408C15 gene
LocusNM_177656 chr2:152241323-152270064(+)
DB links


Entrez 228778
MGI 3045333
Ensembl ENSMUSG00000032680
Vega OTTMUSG00000015836
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001386
(v2.0)
6820408C15RikNM_001289738,NM_177656,NR_110367,NR_110368228778
4.697284.443887.2229912.50758.227160.19744807.483568.93550.175653
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0001499
(v1.0)
6820408C15Rik228778
2-Cell Transient0.95612
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001386
(v2.0)
6820408C15Rik228778
800/4090.4541370/409-0.260174/4091.1117327/4091.004136/4090.4652925/4090.5768
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001386
(v2.0)
6820408C15Rik228778
458/1730.8879194/1730.048868/1732.1772260/1731.903760/1730.5196430/1730.711
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001386
(v2.0)
6820408C15Rik228778
61.110621628.29
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001386
(v2.0)
6820408C15Rik228778
13.12412910.17
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001499
(v1.0)
6820408C15RikNM_177656228778
4.451024.824988.948365.479870
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001499
(v1.0)
6820408C15RikNM_177656228778
8.013566.6075515.889812.10960
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0001499
(v1.0)
6820408C15RikNM_177656228778
4.653951.676565.26416
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0001499
(v1.0)
6820408C15RikNM_177656228778
4.542714.776545.32447
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0001499
(v1.0)
6820408C15RikNM_177656228778
13.057818.3912
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0001499
(v1.0)
6820408C15RikNM_177656228778
4.656651.65365.8397
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0001499
(v1.0)
6820408C15RikNM_177656228778
8.284795.291035.94666
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0001499
(v1.0)
6820408C15RikNM_177656228778
11.978914.9862
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0001499
(v1.0)
6820408C15RikNM_177656228778
1.202156.78337
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0001499
(v1.0)
6820408C15RikNM_177656228778
0.07076240.547672
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0001499
(v1.0)
1441306_atMm.709596820408C15RikNM_177656.3228778
0000244.65
Agilent44K N/A
Proteome N/A