DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0001590
Gene9430038I01Rik
Synonyms
Desc.RIKEN cDNA 9430038I01 gene
LocusNM_029886 chr7:144567252-144602439(-)
DB links


Entrez 77252
MGI 1924502
Ensembl ENSMUSG00000040139
Vega OTTMUSG00000029134
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001474
(v2.0)
9430038I01RikNM_02988677252
6.271413.674311.224921.955511.94914.581461.4242216.456710.24126.6392
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0001590
(v1.0)
9430038I01Rik77252
2-Cell Transient0.97113
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001474
(v2.0)
9430038I01Rik77252
547/462-0.2685362/462-0.4669249/4622.6777659/4621.83866/462-0.7408496/462-0.4956
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001474
(v2.0)
9430038I01Rik77252
269/1810.0585174/181-0.1721206/1813.7011446/1812.61577/181-2.474965/181-2.0515
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001474
(v2.0)
9430038I01Rik77252
59.239212647.02
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001474
(v2.0)
9430038I01Rik77252
12.39927616.31
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001590
(v1.0)
9430038I01RikNM_02988677252
14.21127.7772316.39488.292431.02535
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001590
(v1.0)
9430038I01RikFR104040,NM_02988677252
16.89488.2954418.51459.398811.4676
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0001590
(v1.0)
9430038I01RikNM_02988677252
14.85912.293518.48513
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0001590
(v1.0)
9430038I01RikNM_02988677252
14.5047.6991412.1837
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0001590
(v1.0)
9430038I01RikFR104040,NM_02988677252
8.4236612.3069
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0001590
(v1.0)
9430038I01RikNM_02988677252
14.86782.262113.3627
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0001590
(v1.0)
9430038I01RikNM_02988677252
15.1798.006687.04872
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0001590
(v1.0)
9430038I01RikFR104040,NM_02988677252
9.297258.50375
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0001590
(v1.0)
9430038I01RikNM_02988677252
5.1072130.6148
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0001590
(v1.0)
9430038I01RikNM_02988677252
36.087565.6976
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0001590
(v1.0)
10767H3103C09-3Mm.268769430038I01Rik77252
U029396NAP007977-0019430038I01Rik;TC832317,TC832315Q9CX25U,F,24.09083.7493.64.04513.10783.34833.3634
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0001590
(v1.0)
1453799_atMm.291849430038I01RikNM_029886.277252
0458.25830.3500
0001590
(v1.0)
1435159_atMm.291849430038I01RikNM_029886.277252
001798.100
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0001590
(v1.0)
A_51_P2365889430038I01RikAK07815977252
11P1.5090.154P
Proteome N/A