DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0001617
Gene9630033F20Rik
SynonymsTigar
Desc.RIKEN cDNA 9630033F20 gene
LocusNM_177003 chr6:127035134-127059570(-)
DB links


Entrez 319801
MGI 2442752
Ensembl ENSMUSG00000038028
Vega OTTMUSG00000024108
Featureprotein-coding
GO(BP)
  •   4 Terms
      metabolic process (GO:0008152)
      positive regulation of cardiac muscle cell apoptotic process (GO:0010666)
      negative regulation of macromitophagy (GO:1901525)
      negative regulation of reactive oxygen species metabolic process (GO:2000378)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Fructose and mannose metabolism (mmu00051)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001500
(v2.0)
9630033F20RikNM_177003319801
4.3359519.146519.3322132.347129.13419.62375.3556427.4545102.53818.2248
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0001617
(v1.0)
9630033F20Rik319801
Major ZGA0.99568
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001500
(v2.0)
9630033F20Rik319801
614/473-0.1361424/473-0.273386/4731.1218189/4730.007870/473-0.6908605/473-0.2437
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001500
(v2.0)
9630033F20Rik319801
276/232-0.261178/232-0.495981/2322.0271164/2320.824125/232-1.1254179/232-0.9676
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001500
(v2.0)
9630033F20Rik319801
59.903711651.64
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001500
(v2.0)
9630033F20Rik319801
17.03286825.05
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001617
(v1.0)
9630033F20RikNM_177003319801
19.901713.407298.544589.5793.77561
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001617
(v1.0)
9630033F20RikNM_177003319801
24.288214.7879111.879104.3954.3559
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0001617
(v1.0)
9630033F20RikNM_177003319801
20.80911.585714.6276
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0001617
(v1.0)
9630033F20RikNM_177003319801
20.311713.272620.3341
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0001617
(v1.0)
9630033F20RikNM_177003319801
15.015423.221
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0001617
(v1.0)
9630033F20RikNM_177003319801
20.82121.5639822.3017
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0001617
(v1.0)
9630033F20RikNM_177003319801
91.236886.492170.7621
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0001617
(v1.0)
9630033F20RikNM_177003319801
103.26784.5248
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0001617
(v1.0)
9630033F20RikNM_177003319801
28.348741.685
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0001617
(v1.0)
9630033F20RikNM_177003319801
6.523715.98062
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0001617
(v1.0)
1439859_atMm.1018369630033F20RikNM_177003.5319801
534.95752.5751262.31082.8750
0001617
(v1.0)
1447934_atMm.1018369630033F20RikNM_177003.5319801
378.17501676.6252570.51700.125
0001617
(v1.0)
1435929_atMm.1018369630033F20RikNM_177003.5319801
00450.27500
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0001617
(v1.0)
9630033F20Rik319801
5527128