DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0001683
GeneA4galt
SynonymsGb3 synthase
Desc.alpha 1,4-galactosyltransferase
LocusNM_001170954 chr15:83057152-83082161(-)
NM_001004150 chr15:83057152-83082204(-)
DB links


Entrez 239559
MGI 3512453
Ensembl ENSMUSG00000047878
Featureprotein-coding
GO(BP)
GO(MF)
  •   4 Terms
      galactosyltransferase activity (GO:0008378)
      transferase activity (GO:0016740)
      transferase activity, transferring glycosyl groups (GO:0016757)
      lactosylceramide 4-alpha-galactosyltransferase activity (GO:0050512)
GO(CC)
KEGG
  •   2 Terms
      Glycosphingolipid biosynthesis - globo series (mmu00603)
      Metabolic pathways (mmu01100)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001563
(v2.0)
A4galtNM_001004150,NM_001170954239559
4.803727.484132.919566.815530.126331.043766.421435.377720.025726.7244
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0001683
(v1.0)
A4galt239559
2-Cell Transient0.97694
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001563
(v2.0)
A4galt239559
816/4260.424544/4260.23673/4261.0353461/4261.4398386/4261.90522102/4261.7011
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001563
(v2.0)
A4galt239559
475/1860.8364304/1860.5956/1861.8036343/1862.199296/1862.7011363/1862.2679
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001563
(v2.0)
A4galt239559
79.37216249
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001563
(v2.0)
A4galt239559
18.95449619.74
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001683
(v1.0)
A4galtNM_001004150,NM_001170954239559
28.578222.855749.748620.923346.8301
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001683
(v1.0)
A4galtNM_001004150,NM_001170954239559
76.981645.911377.000232.890281.7647
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0001683
(v1.0)
A4galtNM_001004150,NM_001170954239559
29.88111.7567724.9361
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0001683
(v1.0)
A4galtNM_001004150,NM_001170954239559
29.166922.626226.2383
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0001683
(v1.0)
A4galtNM_001004150,NM_001170954239559
124.124105.377
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0001683
(v1.0)
A4galtNM_001004150,NM_001170954239559
29.89851.7327128.7772
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0001683
(v1.0)
A4galtNM_001004150,NM_001170954239559
46.059420.202313.8687
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0001683
(v1.0)
A4galtNM_001004150,NM_001170954239559
23.722816.2947
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0001683
(v1.0)
A4galtNM_001004150,NM_001170954239559
4.915314.14669
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0001683
(v1.0)
A4galtNM_001004150,NM_001170954239559
0.4432681.14357
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A