DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0001700
GeneA630007B06Rik
SynonymsOtg1
Desc.RIKEN cDNA A630007B06 gene
LocusNM_170757 chr19:56865453-56888173(-)
DB links


Entrez 213993
MGI 2445022
Ensembl ENSMUSG00000035173
Vega OTTMUSG00000028286
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001580
(v2.0)
A630007B06RikNM_170757213993
8.24831116.186111.73557.056818.55643.096528.6829396.955624.71211.68785
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0001700
(v1.0)
A630007B06Rik213993
Maternal RNA0.92305
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001580
(v2.0)
A630007B06Rik213993
730/4490.188466/449-0.062478/4491.0558454/4491.342418/449-2.5182153/449-2.1415
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001580
(v2.0)
A630007B06Rik213993
313/1860.2369197/186-0.033131/1860.9707227/1861.60562/186-3.928368/186-2.027
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001580
(v2.0)
A630007B06Rik213993
117.589612296.38
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001580
(v2.0)
A630007B06Rik213993
55.33345797.08
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001700
(v1.0)
A630007B06RikNM_170757213993
120.68877.171342.499812.84956.05196
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001700
(v1.0)
A630007B06RikFR281817,FR308177,NM_170757213993
509.634268.848211.00467.418624.7721
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0001700
(v1.0)
A630007B06RikNM_170757213993
126.193.0164984.1955
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0001700
(v1.0)
A630007B06RikNM_170757213993
123.17476.396471.6877
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0001700
(v1.0)
A630007B06RikFR281817,FR308177,NM_170757213993
400.909315.577
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0001700
(v1.0)
A630007B06RikNM_170757213993
126.2642.9751878.6246
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0001700
(v1.0)
A630007B06RikNM_170757213993
39.348212.406717.1723
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0001700
(v1.0)
A630007B06RikFR281817,FR308177,NM_170757213993
71.436489.9531
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0001700
(v1.0)
A630007B06RikNM_170757213993
639.793182.619
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0001700
(v1.0)
A630007B06RikNM_170757213993
59.08872.4721
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0001700
(v1.0)
1436073_atMm.131555A630007B06RikNM_170757.1213993
1344.92378.41556.7549.1559.425
0001700
(v1.0)
1431131_s_atMm.131555A630007B06RikNM_170757.1213993
1410.22069.9751737.9447.8455.7
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0001700
(v1.0)
A_52_P256146A630007B06RikBC046394213993
11P0.9040.496P
0001700
(v1.0)
A_52_P288997A630007B06RikNM_170757213993
11P1.0660.638P
0001700
(v1.0)
A_52_P338492A630007B06RikNM_170757213993
11P1.2010.318P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0001700
(v1.0)
A630007B06Rik213993
020040