DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0001716
GeneA730008H23Rik
Synonyms
Desc.RIKEN cDNA A730008H23 gene
LocusNM_172505 chr1:90161403-90174132(-)
DB links


Entrez 212427
MGI 3612871
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001598
(v2.0)
A730008H23RikNM_172505,NM_198652,NR_040291212427
12.993281.4675.9192133.18872.84177.101282.621376.255162.171973.7045
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0001716
(v1.0)
A730008H23Rik2-Cell Transient0.91609
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001598
(v2.0)
A730008H23Rik212427
2337/2151-0.3931826/2151-0.3523659/21511.88852135/21511.3195463/2151-0.15782101/2151-0.6329
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001598
(v2.0)
A730008H23Rik212427
1087/946-0.312860/946-0.2534459/9462.54251197/9461.6682226/946-0.0077963/946-0.5729
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001598
(v2.0)
A730008H23Rik212427
82.081216848.86
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001598
(v2.0)
A730008H23Rik212427
22.76019723.46
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001716
(v1.0)
A730008H23RikNM_172505,NM_198652212427
80.742749.983291.230945.55451.4633
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001716
(v1.0)
A730008H23RikFR072487,FR129933,FR199569,FR327592,NM_172505,NM_198652212427
146.52380.2941140.97387.9835114.329
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0001716
(v1.0)
A730008H23RikNM_172505,NM_198652212427
84.42394.3680654.5328
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0001716
(v1.0)
A730008H23RikNM_172505,NM_198652212427
82.406149.481352.6437
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0001716
(v1.0)
A730008H23RikFR072487,FR129933,FR199569,FR327592,NM_172505,NM_198652212427
472.147327.291
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0001716
(v1.0)
A730008H23RikNM_172505,NM_198652212427
84.4734.3082457.7378
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0001716
(v1.0)
A730008H23RikNM_172505,NM_198652212427
84.465643.984237.8928
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0001716
(v1.0)
A730008H23RikFR072487,FR129933,FR199569,FR327592,NM_172505,NM_198652212427
79.830792.3595
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0001716
(v1.0)
A730008H23RikNM_172505,NM_198652212427
22.695236.0567
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0001716
(v1.0)
A730008H23RikNM_172505,NM_198652212427
46.5636.28998
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0001716
(v1.0)
15934K0311D08-3Mm.22226A730008H23212427
U040917NAP104043-1A730008H23;C330011F01Rik;TC908869,TC908866U,F,23.36633.26783.25193.25233.19253.16483.1948
MOE430 N/A
Agilent44K N/A
Proteome N/A