DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0001789
GeneAI314180
Synonyms
Desc.expressed sequence AI314180
LocusNM_172381 chr4:58812903-58925597(-)
DB links


Entrez 230249
MGI 2140220
Ensembl ENSMUSG00000050812
Vega OTTMUSG00000007619
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001672
(v2.0)
AI314180NM_172381230249
14.1948222.682213.94848.437641.82534.4835127.5293155.3746.6073.27622
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0001789
(v1.0)
AI314180230249
Maternal RNA0.99797
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001672
(v2.0)
AI314180230249
778/4090.414498/4090.1675162/4092.2317447/4091.453870/409-0.483490/409-0.3377
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001672
(v2.0)
AI314180230249
462/1670.9511252/1670.475154/1673.3923401/1672.57716/167-2.5541150/167-0.7484
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001672
(v2.0)
AI314180230249
38.230212929.64
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001672
(v2.0)
AI314180230249
9.81349310.55
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001789
(v1.0)
AI314180NM_172381230249
231.441148.06736.07929.012819.4503
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001789
(v1.0)
AI314180FR478826,NM_172381230249
4291.981977.85504.614455.315344.55
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0001789
(v1.0)
AI314180NM_172381230249
241.9935.1912161.544
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0001789
(v1.0)
AI314180NM_172381230249
236.209146.58115.097
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0001789
(v1.0)
AI314180FR478826,NM_172381230249
5399.83655.49
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0001789
(v1.0)
AI314180NM_172381230249
242.1335.1201126.235
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0001789
(v1.0)
AI314180NM_172381230249
33.403528.013132.3128
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0001789
(v1.0)
AI314180FR478826,NM_172381230249
400.29453.153
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0001789
(v1.0)
AI314180NM_172381230249
81.560419.7524
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0001789
(v1.0)
AI314180NM_172381230249
8.3597813.4427
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0001789
(v1.0)
6851H3035G02-3Mm.76756U025116NAP092221-001AI314180;TC887518U,F,23.59053.3963.02212.92643.90953.37433.6935
0001789
(v1.0)
19694L0291H01-3LOC230249230249
U025116NAP092221-001AI314180;TC887519U,F,23.53313.34212.73253.08923.05993.04923.1224
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0001789
(v1.0)
1452122_atMm.234801AI314180NM_172381.2230249
325.8314.5130.45075.875
0001789
(v1.0)
1436185_atMm.234801AI314180NM_172381.2230249
1754.12722.851328.30368.1
0001789
(v1.0)
1456255_atMm.234801AI314180NM_172381.2230249
361.425548.55276.02500
0001789
(v1.0)
1439127_atMm.234801AI314180NM_172381.2230249
2259.352919.6835.375219.675450.55
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0001789
(v1.0)
A_51_P221886AI314180NM_172381230249
11P0.8890.687P
0001789
(v1.0)
A_52_P185451AI314180AK030369230249
11P0.7210.302P
0001789
(v1.0)
A_52_P416548AI314180AK054077230249
11P4.7230.042P
0001789
(v1.0)
A_52_P613228AI314180NM_172381230249
11P1.0960.526P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0001789
(v1.0)
AI314180230249
46641812419227