DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0001841
GeneAU040320
Synonyms
Desc.expressed sequence AU040320
LocusNM_001035525 chr4:126430799-126546938(+)
NM_133886 chr4:126431014-126531580(+)
NM_001035526 chr4:126431014-126546938(+)
DB links


Entrez 100317
MGI 2140475
Ensembl ENSMUSG00000028830
Vega OTTMUSG00000009282
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001720
(v2.0)
AU040320NM_001035525,NM_001035526,NM_133886100317
15.883231.557947.999911.99145.405712.104965.0546651.05076.711411.59613
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0001841
(v1.0)
AU040320100317
Minor ZGA0.99595
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001720
(v2.0)
AU040320100317
823/4930.2261397/493-0.4276168/4932.0214355/4930.854226/493-2.1449158/493-2.2302
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001720
(v2.0)
AU040320100317
396/1870.5671165/187-0.295156/1873.2581329/1872.13149/187-2.198996/187-1.5464
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001720
(v2.0)
AU040320100317
97.657122044.39
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001720
(v2.0)
AU040320100317
23.365414316.34
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001841
(v1.0)
AU040320NM_001035525,NM_001035526,NM_133886100317
32.814333.36768.936243.750673.52074
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001841
(v1.0)
AU040320FR236011,FR251389,NM_001035525,NM_001035526,NM_133886100317
627.928581.296179.72367.643232.7598
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0001841
(v1.0)
AU040320NM_001035525,NM_001035526,NM_133886100317
34.31045.8086736.4048
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0001841
(v1.0)
AU040320NM_001035525,NM_001035526,NM_133886100317
33.490433.032637.8412
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0001841
(v1.0)
AU040320FR236011,FR251389,NM_001035525,NM_001035526,NM_133886100317
510.193435.412
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0001841
(v1.0)
AU040320NM_001035525,NM_001035526,NM_133886100317
34.33035.7291141.5029
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0001841
(v1.0)
AU040320NM_001035525,NM_001035526,NM_133886100317
8.273573.621424.66957
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0001841
(v1.0)
AU040320FR236011,FR251389,NM_001035525,NM_001035526,NM_133886100317
29.809749.5936
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0001841
(v1.0)
AU040320NM_001035525,NM_001035526,NM_133886100317
7.25363.32661
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0001841
(v1.0)
AU040320NM_001035525,NM_001035526,NM_133886100317
19.229623.5775
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0001841
(v1.0)
10421H3095G10-3Mm.206206AU040320100317
U004833NAP000280-001AU040320;Ncdn;TC836776U,F,24.43164.2593.70943.95723.9383.85053.9366
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0001841
(v1.0)
1452150_atMm.206206AU040320NM_133886.2,NM_001035526.1,NM_001035525.1100317
323.575456.575283.675167.55117.8
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0001841
(v1.0)
A_51_P276599AU040320NM_133886100317
11P1.2560.262P
0001841
(v1.0)
A_52_P378914AU040320NM_133886100317
11P1.0790.646P
Proteome N/A