DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0001884
GeneAass
SynonymsLOR/SDH
Lorsdh
Desc.aminoadipate-semialdehyde synthase
LocusNM_013930 chr6:23022173-23082986(-)
DB links


Entrez 30956
MGI 1353573
Ensembl ENSMUSG00000029695
Vega OTTMUSG00000023540
Featureprotein-coding
GO(BP)
GO(MF)
  •   5 Terms
      nucleotide binding (GO:0000166)
      catalytic activity (GO:0003824)
      oxidoreductase activity (GO:0016491)
      saccharopine dehydrogenase (NADP+, L-lysine-forming) activity (GO:0047130)
      saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity (GO:0047131)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001762
(v2.0)
AassNM_01393030956
0.54168456.088655.951875.306367.84720.0853494058.540866.6630.227054
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0001884
(v1.0)
Aass30956
2-Cell Transient0.96299
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001762
(v2.0)
Aass30956
566/3840.0468460/3840.14419/384-0.7069210/3840.458174/3840.9085963/3840.7256
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001762
(v2.0)
Aass30956
336/1950.2709242/1950.194412/195-0.3929154/1950.9816144/1951.5999771/1951.3794
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001762
(v2.0)
Aass30956
54.48978167.27
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001762
(v2.0)
Aass30956
20.5324446.66
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001884
(v1.0)
AassNM_01393030956
58.282838.726856.052747.08330
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001884
(v1.0)
AassNM_01393030956
2386.61441.982601.452318.60
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0001884
(v1.0)
AassNM_01393030956
60.940.19809942.2518
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0001884
(v1.0)
AassNM_01393030956
59.483538.337943.311
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0001884
(v1.0)
AassNM_01393030956
1499.831284.54
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0001884
(v1.0)
AassNM_01393030956
60.97540.19538647.502
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0001884
(v1.0)
AassNM_01393030956
51.896145.460845.9601
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0001884
(v1.0)
AassNM_01393030956
2469.752607.64
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0001884
(v1.0)
AassNM_01393030956
17.54753.20817
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0001884
(v1.0)
AassNM_01393030956
1.675892.16178
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0001884
(v1.0)
1423523_atMm.18651AassNM_013930.430956
841.125311.42550.42500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0001884
(v1.0)
A_51_P483544AassNM_01393030956
11P0.7150.184P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0001884
(v1.0)
Aass30956
445441215365155