DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0001931
GeneAbcf3
Synonyms
Desc.ATP-binding cassette, sub-family F (GCN20), member 3
LocusNM_013852 chr16:20548676-20561676(+)
DB links


Entrez 27406
MGI 1351656
Ensembl ENSMUSG00000003234
Vega OTTMUSG00000023912
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001809
(v2.0)
Abcf3NM_01385227406
24.3414168.714158.92428.110534.204321.730417.2752164.4633.052421.6325
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0001931
(v1.0)
Abcf327406
Maternal RNA0.99951
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001809
(v2.0)
Abcf327406
818/5210.1377531/521-0.0886703/5214.00211741/5213.065711/521-3.3939108/521-2.8523
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001809
(v2.0)
Abcf327406
427/2600.2022278/260-0.0196671/2604.90521586/2603.92715/260-3.402553/260-2.8587
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001809
(v2.0)
Abcf327406
103.236616761.82
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001809
(v2.0)
Abcf327406
31.15539233.86
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001931
(v1.0)
Abcf3NM_01385227406
175.388110.54220.929823.753312.1836
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001931
(v1.0)
Abcf3NM_01385227406
4448.382920.13530.195705.111260.2
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0001931
(v1.0)
Abcf3NM_01385227406
183.3848.90189120.604
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0001931
(v1.0)
Abcf3NM_01385227406
179.001109.432121.877
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0001931
(v1.0)
Abcf3NM_01385227406
1013.181142.43
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0001931
(v1.0)
Abcf3NM_01385227406
183.4918.77997133.671
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0001931
(v1.0)
Abcf3NM_01385227406
19.377822.934823.012
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0001931
(v1.0)
Abcf3NM_01385227406
746.129582.192
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0001931
(v1.0)
Abcf3NM_01385227406
113.59617.8431
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0001931
(v1.0)
Abcf3NM_01385227406
3.257483.50161
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0001931
(v1.0)
6678H3031B01-3Mm.27135Abcf327406
U016920NAP001743-002Abcf3;TC804760,TC804756U,F,23.74233.64663.71083.64443.97173.73173.8617
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0001931
(v1.0)
1426747_atMm.27135Abcf3NM_013852.227406
1051.475737.925237.150187.325
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0001931
(v1.0)
A_51_P468531Abcf3AK03062627406
11P0.6910.169P
0001931
(v1.0)
A_52_P438530Abcf3NM_01385227406
11P0.8410.505P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0001931
(v1.0)
Abcf327406
571691