DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0001955
GeneAbi1
SynonymsE3B1
Ssh3bp1
Desc.abl-interactor 1
LocusNM_145994 chr2:22795509-22895760(-)
NM_007380 chr2:22795509-22895760(-)
NM_001077190 chr2:22795509-22895760(-)
NM_001077193 chr2:22795509-22895760(-)
NM_001077192 chr2:22795509-22895760(-)
DB links


Entrez 11308
MGI 104913
Ensembl ENSMUSG00000058835
Vega OTTMUSG00000016621
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM N/A
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0001955
(v1.0)
Abi111308
Minor ZGA0.94054
SPR_Histone_Erkek_+-5KfromTSS N/A
SPR_Histone_Erkek_+-2KfromTSS N/A
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001837
(v2.0)
Abi111308
37.525812629.78
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001837
(v2.0)
Abi111308
8.7922939.45
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001955
(v1.0)
Abi1NM_001077190,NM_001077192,NM_001077193,NM_007380,NM_14599411308
69.115773.645847.485522.712418.948
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0001955
(v1.0)
Abi1NM_001077190,NM_001077192,NM_001077193,NM_007380,NM_14599411308
85.111481.874654.554526.733122.5427
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0001955
(v1.0)
Abi1NM_001077190,NM_001077192,NM_001077193,NM_007380,NM_14599411308
72.26687.896580.3491
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0001955
(v1.0)
Abi1NM_001077190,NM_001077192,NM_001077193,NM_007380,NM_14599411308
70.539672.906361.573
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0001955
(v1.0)
Abi1NM_001077190,NM_001077192,NM_001077193,NM_007380,NM_14599411308
83.158174.1294
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0001955
(v1.0)
Abi1NM_001077190,NM_001077192,NM_001077193,NM_007380,NM_14599411308
72.30887.7883467.5311
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0001955
(v1.0)
Abi1NM_001077190,NM_001077192,NM_001077193,NM_007380,NM_14599411308
43.964221.929719.2521
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0001955
(v1.0)
Abi1NM_001077190,NM_001077192,NM_001077193,NM_007380,NM_14599411308
26.444723.3672
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0001955
(v1.0)
Abi1NM_001077190,NM_001077192,NM_001077193,NM_007380,NM_14599411308
153.70915.1312
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0001955
(v1.0)
Abi1NM_001077190,NM_001077192,NM_001077193,NM_007380,NM_14599411308
16.106436.3886
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0001955
(v1.0)
4977G0117D04-3Mm.695Ssh3bp111308
U022352NAP104484-1Ssh3bp1;TC919368,TC911814,TC869768,TC828675Q60747U,F,23.48513.36262.993.11152.6212.86122.9463
0001955
(v1.0)
16425K0416F07-3Mm.695Ssh3bp111308
U022352NAP120956-001Ssh3bp1;TC919368,TC911814,TC869768,TC828675Q60747U,F,23.62433.47772.90972.92982.84582.88642.8977
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0001955
(v1.0)
1450890_a_atMm.205647Abi1NM_001077190.1,NM_145994.1,NM_007380.2,NM_001077192.1,NM_001077193.111308
333.55428.175289.42597.4120.525
0001955
(v1.0)
1438506_s_atMm.205647Abi1NM_001077190.1,NM_145994.1,NM_007380.2,NM_001077192.1,NM_001077193.111308
82.625110.575105.12578.8571.925
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0001955
(v1.0)
A_51_P392963Abi1NM_00738011308
11P0.4560.0804P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0001955
(v1.0)
Abi111308
0.8101.610