DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002085
GeneActr1a
Synonyms
Desc.ARP1 actin-related protein 1A, centractin alpha
LocusNM_016860 chr19:46451304-46470225(-)
DB links


Entrez 54130
MGI 1858964
Ensembl ENSMUSG00000025228
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2001965
(v2.0)
Actr1aNM_01686054130
61.663778.43148.08537.386439.345731.792443.8761197.89136.090235.3802
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002085
(v1.0)
Actr1a54130
Minor ZGA0.99184
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001965
(v2.0)
Actr1a54130
749/4790.1319567/4790.12691471/4795.18473468/4794.180142/479-1.4323284/479-1.3488
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2001965
(v2.0)
Actr1a54130
364/2030.3282279/2030.34111138/2036.00552436/2034.899117/203-1.466966/203-2.1946
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001965
(v2.0)
Actr1a54130
67.088820233.21
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2001965
(v2.0)
Actr1a54130
8.18211296.34
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002085
(v1.0)
Actr1aNM_01686054130
81.5401102.4927.817627.28731.3386
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002085
(v1.0)
Actr1aNM_01686054130
245.257380.96597.8426114.026122.814
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002085
(v1.0)
Actr1aNM_01686054130
85.257622.551111.819
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002085
(v1.0)
Actr1aNM_01686054130
83.2199101.461146.637
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002085
(v1.0)
Actr1aNM_01686054130
626.281342.05
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002085
(v1.0)
Actr1aNM_01686054130
85.307222.2422160.826
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002085
(v1.0)
Actr1aNM_01686054130
25.754826.346725.0226
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002085
(v1.0)
Actr1aNM_01686054130
66.501749.0314
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002085
(v1.0)
Actr1aNM_01686054130
40.28385.64862
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002085
(v1.0)
Actr1aNM_01686054130
58.501530.2064
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002085
(v1.0)
6616H3029C11-3Mm.3118Actr1a54130
U039110NAP094884-001Actr1a;TC886152,TC886145Q9D2K9U,F,23.59373.5193.26863.22523.21723.25773.2526
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002085
(v1.0)
1415873_a_atMm.3118Actr1aNM_016860.154130
389.85645.7468.875186.75314.1
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002085
(v1.0)
A_51_P509760Actr1aNM_01686054130
11P1.5760.137P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002085
(v1.0)
Actr1a54130
4417113