DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002193
GeneAdd1
Synonyms
Desc.adducin 1 (alpha)
LocusNM_001102444 chr5:34916363-34974954(+)
NM_013457 chr5:34916363-34974954(+)
NM_001024458 chr5:34916363-34974954(+)
DB links


Entrez 11518
MGI 87918
Ensembl ENSMUSG00000029106
Vega OTTMUSG00000023097
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002074
(v2.0)
Add1NM_001024458,NM_001102444,NM_01345711518
31.933944.074157.02626.221215.918637.736752.484649.872517.048929.9893
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002193
(v1.0)
Add111518
Minor ZGA0.96608
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002074
(v2.0)
Add111518
651/4270.0954408/427-0.1814155/4272.108314/4270.883920/427-2.302150/427-2.0975
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002074
(v2.0)
Add111518
319/1770.3353190/177-0.0139149/1773.2666301/1772.08179/177-2.121464/177-2.0413
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002074
(v2.0)
Add111518
53.284610650.27
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002074
(v2.0)
Add111518
12.86326320.42
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002193
(v1.0)
Add1NM_001024458,NM_001102444,NM_01345711518
45.829939.50819.494611.018136.5627
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002193
(v1.0)
Add1NM_001024458,NM_001102444,NM_01345711518
55.33148.012329.854219.124459.0806
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002193
(v1.0)
Add1NM_001024458,NM_001102444,NM_01345711518
47.919411.678543.1041
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002193
(v1.0)
Add1NM_001024458,NM_001102444,NM_01345711518
46.774139.111336.9444
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002193
(v1.0)
Add1NM_001024458,NM_001102444,NM_01345711518
372.209473.221
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002193
(v1.0)
Add1NM_001024458,NM_001102444,NM_01345711518
47.947311.518640.5194
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002193
(v1.0)
Add1NM_001024458,NM_001102444,NM_01345711518
18.048910.638411.7935
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002193
(v1.0)
Add1NM_001024458,NM_001102444,NM_01345711518
73.487981.79
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002193
(v1.0)
Add1NM_001024458,NM_001102444,NM_01345711518
32.990211.1742
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002193
(v1.0)
Add1NM_001024458,NM_001102444,NM_01345711518
73.160972.7927
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002193
(v1.0)
18962L0238F01-3Mm.29052Add111518
U005490NAP094939-001Add1;TC936791,TC793863Q9QYC0U,F4.1443.98873.23123.6022.9973.193.5707
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002193
(v1.0)
A_51_P282404Add1NM_01345711518
11P1.7690.111P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002193
(v1.0)
Add111518
110110