DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002268
GeneAgfg2
SynonymsHrbl
Desc.ArfGAP with FG repeats 2
LocusNM_178162 chr5:138092082-138125845(-)
NM_145566 chr5:138104052-138125921(-)
DB links


Entrez 231801
MGI 2443267
Ensembl ENSMUSG00000029722
Vega OTTMUSG00000021990
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002149
(v2.0)
Agfg2NM_145566,NM_178162231801
11.99413.36816.185618.963619.61376.144299.3386113.71219.2925.83971
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002268
(v1.0)
Agfg2231801
Major ZGA0.89638
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002149
(v2.0)
Agfg2231801
669/4660.0088345/466-0.548596/4661.2997244/4660.396126/4660.1695698/466-0.0164
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002149
(v2.0)
Agfg2231801
341/1890.337162/189-0.336691/1892.4726230/1891.601790/1890.9719489/1890.7689
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002149
(v2.0)
Agfg2231801
83.912218046.62
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002149
(v2.0)
Agfg2231801
21.026911418.44
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002268
(v1.0)
Agfg2NM_145566,NM_178162231801
13.903511.244514.113913.56926.62456
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002268
(v1.0)
Agfg2NM_145566,NM_178162231801
109.284138.66276.886986.134735.2151
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002268
(v1.0)
Agfg2NM_145566,NM_178162231801
14.53744.3863112.268
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002268
(v1.0)
Agfg2NM_145566,NM_178162231801
14.189911.131610.1916
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002268
(v1.0)
Agfg2NM_145566,NM_178162231801
43.0403147.271
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002268
(v1.0)
Agfg2NM_145566,NM_178162231801
14.54584.3262311.1778
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002268
(v1.0)
Agfg2NM_145566,NM_178162231801
13.067313.101613.3582
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002268
(v1.0)
Agfg2NM_145566,NM_178162231801
57.301231.5837
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002268
(v1.0)
Agfg2NM_145566,NM_178162231801
4.430623.38648
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002268
(v1.0)
Agfg2NM_145566,NM_178162231801
1.911823.13196
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002268
(v1.0)
17841L0022E09-3Mm.35097LOC231801231801
U041936NAP011857-001TC810151,TC8101503.2443.13432.94493.02973.31523.07873.1434
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002268
(v1.0)
1425362_atMm.260869Agfg2NM_178162.2,NM_145566.1231801
50.2540.72553.3579.553.375
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002268
(v1.0)
A_51_P232384HrblNM_145566231801
11P0.3740.069P
0002268
(v1.0)
A_51_P496074HrblNM_178162231801
11P0.6260.134P
Proteome N/A