DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002269
GeneAggf1
SynonymsVG5Q
Desc.angiogenic factor with G patch and FHA domains 1
LocusNM_025630 chr13:96120672-96145289(-)
DB links


Entrez 66549
MGI 1913799
Ensembl ENSMUSG00000021681
Vega OTTMUSG00000030737
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002150
(v2.0)
Aggf1NM_02563066549
11.66896.9515211.9443112.988111.18812.190415.729211.835283.657814.1329
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002269
(v1.0)
Aggf166549
Major ZGA0.99775
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002150
(v2.0)
Aggf166549
661/3940.2331469/3940.1349144/3942.1152396/3941.33378/394-0.2756381/394-0.6457
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002150
(v2.0)
Aggf166549
295/1560.4041221/1560.3841134/1563.2844357/1562.506615/156-1.265658/156-1.9988
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002150
(v2.0)
Aggf166549
65.024314046.45
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002150
(v2.0)
Aggf166549
14.9488816.99
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002269
(v1.0)
Aggf1NM_02563066549
7.356648.4415785.483878.205411.3585
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002269
(v1.0)
Aggf1NM_02563066549
86.2969140.761450.931052.93113.007
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002269
(v1.0)
Aggf1NM_02563066549
7.692044.348689.20993
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002269
(v1.0)
Aggf1NM_02563066549
7.508198.356818.92726
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002269
(v1.0)
Aggf1NM_02563066549
359.207209.66
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002269
(v1.0)
Aggf1NM_02563066549
7.696514.289119.79112
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002269
(v1.0)
Aggf1NM_02563066549
79.144775.510558.9022
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002269
(v1.0)
Aggf1NM_02563066549
1105.45634.313
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002269
(v1.0)
Aggf1NM_02563066549
7.586135.0705
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002269
(v1.0)
Aggf1NM_02563066549
4.650113.37349
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002269
(v1.0)
21479L0855H10-3Mm.367852010009L17Rik66549
U035052NAP001680-001TC810072,TC810071Q9CQR9U,F,23.50843.38013.52953.89133.66223.58053.511
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002269
(v1.0)
1425354_a_atMm.36785Aggf1NM_025630.266549
145.825131.05521.075668.775360.875
Agilent44K N/A
Proteome N/A