DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002313
GeneAifm1
SynonymsAIF
AIFsh2
apoptosis-inducing factor
Pdcd8
Desc.apoptosis-inducing factor, mitochondrion-associated 1
LocusNM_012019 chrX:45828121-45866603(-)
DB links


Entrez 26926
MGI 1349419
Ensembl ENSMUSG00000036932
Vega OTTMUSG00000017542
Featureprotein-coding
GO(BP)
  •   10 Terms
      apoptotic DNA fragmentation (GO:0006309)
      apoptotic process (GO:0006915)
      activation of cysteine-type endopeptidase activity involved in apoptotic process (GO:0006919)
      apoptotic mitochondrial changes (GO:0008637)
      neuron differentiation (GO:0030182)
      mitochondrial respiratory chain complex I assembly (GO:0032981)
      cell redox homeostasis (GO:0045454)
      neuron apoptotic process (GO:0051402)
      oxidation-reduction process (GO:0055114)
      intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (GO:0070059)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002195
(v2.0)
Aifm1NM_001290364,NM_01201926926
9.8541710.75247.0822418.252623.057113.622224.87495.0529723.150713.8921
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002313
(v1.0)
Aifm126926
MGA0.97477
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002195
(v2.0)
Aifm126926
328/1720.4164252/1720.432661/1722.0306278/1722.008226/172-0.6481191/172-0.4452
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002195
(v2.0)
Aifm126926
185/730.8202130/730.708759/733.0963219/732.87395/73-1.627139/73-1.4684
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002195
(v2.0)
Aifm126926
31.56626449.32
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002195
(v2.0)
Aifm126926
14.10324233.58
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002313
(v1.0)
Aifm1NM_01201926926
11.555.2117914.476317.165618.8048
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002313
(v1.0)
Aifm1NM_01201926926
49.673817.666560.946159.7985.7263
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002313
(v1.0)
Aifm1NM_01201926926
12.07653.80635.68618
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002313
(v1.0)
Aifm1NM_01201926926
11.78795.159463.62081
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002313
(v1.0)
Aifm1NM_01201926926
22.349954.6946
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002313
(v1.0)
Aifm1NM_01201926926
12.08363.754173.97118
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002313
(v1.0)
Aifm1NM_01201926926
13.402816.574117.0597
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002313
(v1.0)
Aifm1NM_01201926926
297.794226.192
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002313
(v1.0)
Aifm1NM_01201926926
11.526731.112
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002313
(v1.0)
Aifm1NM_01201926926
6.841727.25957
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002313
(v1.0)
14526J0549G08-3Mm.30050Pdcd826926
U039356NAP099730-001Pdcd8;TC831108,TC831107,TC831106Q9Z0X1U,F3.61153.68243.71244.22813.46733.67643.9026
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002313
(v1.0)
1418127_a_atMm.240434Aifm1NM_012019.226926
517.925267.825399.525372.65689.3
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002313
(v1.0)
A_52_P680735Pdcd8NM_01201926926
11P0.8740.407P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002313
(v1.0)
Aifm126926
151914212924