DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002422
GeneAlkbh2
SynonymsAbh2
mABH2
Desc.alkB, alkylation repair homolog 2 (E. coli)
LocusNM_175016 chr5:114573943-114578185(-)
DB links


Entrez 231642
MGI 2141032
Ensembl ENSMUSG00000044339
Vega OTTMUSG00000014449
Featureprotein-coding
GO(BP)
GO(MF)
  •   9 Terms
      endonuclease activity (GO:0004519)
      exonuclease activity (GO:0004527)
      ferrous iron binding (GO:0008198)
      oxidoreductase activity (GO:0016491)
      oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (GO:0016702)
      oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706)
      DNA-N1-methyladenine dioxygenase activity (GO:0043734)
      metal ion binding (GO:0046872)
      cytosine C-5 DNA demethylase activity (GO:0051747)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002306
(v2.0)
Alkbh2NM_175016231642
4.394719.3011216.220121.699619.817523.17152.1812717.205223.530925.9538
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002422
(v1.0)
Alkbh2231642
Major ZGA0.8719
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002306
(v2.0)
Alkbh2231642
915/5140.3186434/514-0.3595253/5142.5505616/5141.587728/514-2.1015276/514-1.4914
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002306
(v2.0)
Alkbh2231642
293/1700.2711136/170-0.435173/1702.3017190/1701.478113/170-1.5792117/170-1.1283
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002306
(v2.0)
Alkbh2231642
113.377925344.81
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002306
(v2.0)
Alkbh2231642
25.8529128.41
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002422
(v1.0)
Alkbh2NM_175016231642
9.6708311.31316.17813.78121.50197
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002422
(v1.0)
Alkbh2NM_175016231642
12.843515.009920.092218.74632.17038
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002422
(v1.0)
Alkbh2NM_175016231642
10.11171.6071912.3427
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002422
(v1.0)
Alkbh2NM_175016231642
9.8700611.199412.8161
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002422
(v1.0)
Alkbh2NM_175016231642
19.352819.6502
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002422
(v1.0)
Alkbh2NM_175016231642
10.11761.5851814.0562
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002422
(v1.0)
Alkbh2NM_175016231642
14.978313.306316.3234
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002422
(v1.0)
Alkbh2NM_175016231642
23.661526.6954
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002422
(v1.0)
Alkbh2NM_175016231642
8.9623328.1738
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002422
(v1.0)
Alkbh2NM_175016231642
31.072315.5941
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002422
(v1.0)
10075H3090F07-39530023G02231642
U026598NAP010338-001TC932135U,F,23.93793.97573.82074.05283.66543.77683.6434
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002422
(v1.0)
1455673_atMm.332593Alkbh2NM_175016.2231642
0433.75523.100
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002422
(v1.0)
A_51_P496780AU016977NM_175016231642
11P0.8830.432P
Proteome N/A